RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SIGLEC6O43699 453 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 TLX2O43763 284 aaPredicted RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 MAN1A2O60476 641 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 HCN1O60741 890 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 ZIC2O95409 532 aaPredicted RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 SOX14O95416 240 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 IL33O95760 270 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 CSTAP01040 98 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 RPLP0P05388 317 aaKnown RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 HTR1AP08908 422 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 OR1D4P47884 311 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 SLC6A8P48029 635 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 TUBA1BP68363 451 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 PRKCDQ05655 676 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 MAPK14Q16539 360 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 SMN1Q16637 294 aaKnown RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 DGUOKQ16854 277 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 ARMC4Q5T2S8 1044 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 PDZK1Q5T2W1 519 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 TMEM236Q5W0B7 351 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 Q6ZPB1 254 aaPredicted RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 LINC00299Q6ZSB3 139 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 TUBA1AQ71U36 451 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 ARHGAP22Q7Z5H3 698 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 HMGN2P46Q86SG4 172 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 MRGPREQ86SM8 312 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 CROCCP3Q8IVE0 287 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 NKAIN4Q8IVV8 208 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 NRMQ8IXM6 262 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 BCORP1Q8N888 145 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 LSMEM1Q8N8F7 131 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 OR2T33Q8NG76 320 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 TMEM163Q8TC26 289 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 UBE2FQ969M7 185 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 CLIP3Q96DZ5 547 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 FAM46AQ96IP4 442 aaKnown RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 WFDC6Q9BQY6 131 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 IL20Q9NYY1 176 aa10.29□□□□□ -0.76
SKA2-204ENST00000578519 AKAP7Q9P0M2 348 aaPredicted RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 DHCR7Q9UBM7 475 aaKnown RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 C19orf25Q9UFG5 118 aaPredicted RBP10.29□□□□□ -0.76
SKA2-204ENST00000578519 IGKV3D-11A0A0A0MRZ8 115 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 C2orf92A0A1B0GVN3 265 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 TCRBV16S1A1N1A0A5B0 115 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 TRIM64BA6NI03 449 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 PEX12O00623 359 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 ARHGAP33O14559 1287 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 PRODHO43272 600 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 ENTPD6O75354 484 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 INMTO95050 263 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 RAB36O95755 333 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 HEXBP07686 556 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 STSP08842 583 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CT45A8P0DMV1 189 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CT45A9P0DMV2 189 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 PNMTP11086 282 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 IFI30P13284 250 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 MYL12AP19105 171 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 IL12BP29460 328 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CSF2RBP32927 897 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 GRK5P34947 590 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 MAP2K4P45985 399 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 GCGRP47871 477 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CLK1P49759 484 aaKnown RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 CTBP2P56545 445 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 NRG3P56975 720 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 SLC37A1P57057 533 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CCL7P80098 99 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 DCDP81605 110 aaKnown RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 RHAGQ02094 409 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CFHR1Q03591 330 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 PIGFQ07326 219 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 NFATC3Q12968 1075 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 TMED1Q13445 227 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 TIGD6Q17RP2 521 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 ZNF528Q3MIS6 628 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CT45A2Q5DJT8 189 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 SLC23A3Q6PIS1 610 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 DGAT2L6Q6ZPD8 337 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 TMPRSS11FQ6ZWK6 438 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 COMTD1Q86VU5 262 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 GATAD2AQ86YP4 633 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 GID4Q8IVV7 300 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 CCDC103Q8IW40 242 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 EID2Q8N6I1 236 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 DTWD2Q8NBA8 298 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 SIMC1Q8NDZ2 872 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 C17orf47Q8NEP4 570 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 SLC2A12Q8TD20 617 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 BRIX1Q8TDN6 353 aaKnown RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 DOK4Q8TEW6 326 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 PTPMT1Q8WUK0 201 aaPredicted RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 YIPF6Q96EC8 236 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 SIGLEC11Q96RL6 698 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 GFM1Q96RP9 751 aaKnown RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 IL4I1Q96RQ9 567 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 NUDT22Q9BRQ3 303 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 MND1Q9BWT6 205 aa10.28□□□□□ -0.76
SKA2-204ENST00000578519 RSPO3Q9BXY4 272 aaPredicted RBP10.28□□□□□ -0.76
SKA2-204ENST00000578519 SLC19A3Q9BZV2 496 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms