RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZNF860A6NHJ4 632 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZAR1LA6NP61 321 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 S1PR1P21453 382 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 TCEAL5Q5H9L2 206 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 FIBINQ8TAL6 211 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 PHOSPHO1Q8TCT1 267 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 DOK4Q8TEW6 326 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 CMKLR1Q99788 373 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 P2RY12Q9H244 342 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 CHMP1AQ9HD42 196 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 ASB6Q9NWX5 421 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 I6L893 689 aaPredicted RBP12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 RAB3DO95716 219 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 APODP05090 189 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 CSF1P09603 554 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 FURINP09958 794 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 DLSTP36957 453 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 DUSP7Q16829 419 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF546Q86UE3 836 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR5M3Q8NGP4 307 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM239Q8WW34 195 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 IRF7Q92985 503 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 TCEAL3Q969E4 200 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 LRIG1Q96JA1 1093 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 NECAB3Q96P71 396 aaPredicted RBP12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 C14orf166Q9Y224 244 aaKnown RBP12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 V9GY05 133 aa12.33□□□□□ -0.43
PCDHGB3-201ENST00000576222 VEGFDO43915 354 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 SFTPBP07988 381 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 ADH6P28332 368 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 CHRNEQ04844 493 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 RAB11BQ15907 218 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 KCTD18Q6PI47 426 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 LINC01465Q8N7H1 131 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR5AK2Q8NH90 309 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 DHDHQ9UQ10 334 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM129A0AVI4 362 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 RGS13O14921 159 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 PTGER1P34995 402 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 ETV5P41161 510 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 CTSCP53634 463 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 CTBSQ01459 385 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 HTR4Q13639 388 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 MAPK14Q16539 360 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 ITPRIPL2Q3MIP1 535 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 SYT14P1Q58G82 188 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 NKAPLQ5M9Q1 402 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 KIAA1211LQ6NV74 962 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLC35F2Q8IXU6 374 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 PELOQ9BRX2 385 aaKnown RBP12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 KATNB1Q9BVA0 655 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM30AQ9NV96 361 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM184CQ9NVA4 438 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 EDDM13A0A1B0GTR0 161 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 GYPBP06028 91 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 AKR1C4P17516 323 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 RBMXP38159 391 aaKnown RBP12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 PSMB10P40306 273 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 VEGFCP49767 419 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 GPR143P51810 404 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 CLDN20P56880 219 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 DEFB134Q4QY38 66 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 ALG10BQ5I7T1 473 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 GPR135Q8IZ08 494 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 SVBPQ8N300 66 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 PNLDC1Q8NA58 520 aaKnown RBP12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR2AJ1Q8NGZ0 328 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 ST8SIA4Q92187 359 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 SFXN2Q96NB2 322 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 PFDN5Q99471 154 aa12.33□□□□□ -0.44
PCDHGB3-201ENST00000576222 SDC3O75056 442 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 CSTAP01040 98 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 MC3RP41968 323 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 RASGEF1BQ0VAM2 473 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 MPP7Q5T2T1 576 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 DNM1P34Q6PK57 102 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 FCRLAQ7L513 359 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR4N5Q8IXE1 308 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 MED17Q9NVC6 651 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 MICAL3Q7RTP6 2002 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 TRABD2BA6NFA1 517 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 SCDO00767 359 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 TNFRSF10BO14763 440 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 SPARCP09486 303 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 UBBP0CG47 229 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 UBCP0CG48 685 aaKnown RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF865P0CJ78 1059 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 AKAIN1P0CW23 69 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 AKT2P31751 481 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 S100A11P31949 105 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 GPR50Q13585 617 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 KANSL1Q7Z3B3 1105 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 C12orf45Q8N5I9 185 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 LMF1Q96S06 567 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 R3HDMLQ9H3Y0 253 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ACTL8Q9H568 366 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms