RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 PRSS53Q2L4Q9 553 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 ZNF672Q499Z4 452 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-204ENST00000570902 TMEM201Q5SNT2 666 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 FAM71E1Q6IPT2 247 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 FIGNL1Q6PIW4 674 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 DNAJC14Q6Y2X3 702 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-204ENST00000570902 GABRG1Q8N1C3 465 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 GPR151Q8TDV0 419 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 SLC9A6Q92581 669 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 HS6ST2Q96MM7 605 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 RNF145Q96MT1 663 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 TMEM237Q96Q45 408 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 TXLNGYQ9BZA5 131 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 MYNNQ9NPC7 610 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 TIGARQ9NQ88 270 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 MED17Q9NVC6 651 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 FBXO34Q9NWN3 711 aa16.92■□□□□ 0.3
SCARF1-204ENST00000570902 A0A0J9YW62 118 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 GXYLT2A0PJZ3 443 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 A8MV72 311 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-204ENST00000570902 GCM2O75603 506 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-204ENST00000570902 IGKV1D-16P01601 117 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 IGHV4-39P01824 125 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 IMPDH1P20839 514 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 PSMA4P25789 261 aaKnown RBP16.91■□□□□ 0.3
SCARF1-204ENST00000570902 ADH6P28332 368 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 GCAP28676 217 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 CARD18P57730 90 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 PLPPR5Q32ZL2 321 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 SFRP5Q5T4F7 317 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 DNM1P46Q6ZS02 220 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 MISPQ8IVT2 679 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 PIK3R3Q92569 461 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 OSTF1Q92882 214 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 ALG2Q9H553 416 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 TMEM185BQ9H7F4 350 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 TIMM22Q9Y584 194 aa16.91■□□□□ 0.3
SCARF1-204ENST00000570902 ZNF500O60304 480 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-204ENST00000570902 ADAM11O75078 769 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 OXSR1O95747 527 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-204ENST00000570902 THBS1P07996 1170 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 PRPS2P11908 318 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 ATP5F1P24539 256 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-204ENST00000570902 SLC18A2Q05940 514 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 TAB1Q15750 504 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 TFAP2EQ6VUC0 442 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 IKBIPQ70UQ0 350 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 TRABD2AQ86V40 505 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 SLC22A9Q8IVM8 553 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 LILRA2Q8N149 483 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 OR4C3Q8NH37 302 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 FAM76AQ8TAV0 307 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCARF1-204ENST00000570902 RNF128Q8TEB7 428 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 KISS1RQ969F8 398 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-204ENST00000570902 CPNE4Q96A23 557 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-204ENST00000570902 KLHL15Q96M94 604 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 IQCGQ9H095 443 aaKnown RBP16.9■□□□□ 0.3
SCARF1-204ENST00000570902 GP6Q9HCN6 339 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 EQTNQ9NQ60 294 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 FAIMQ9NVQ4 179 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 KLHL13Q9P2N7 655 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 CR1P17927 2039 aa16.9■□□□□ 0.3
SCARF1-204ENST00000570902 ABCA1O95477 2261 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 DLX3O60479 287 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 NKX2-2O95096 273 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 HPGDP15428 266 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 EIF1P41567 113 aaKnown RBP16.89■□□□□ 0.29
SCARF1-204ENST00000570902 PRKAA2P54646 552 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 FAPQ12884 760 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 P2RY6Q15077 328 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 ZNF239Q16600 458 aaKnown RBP16.89■□□□□ 0.29
SCARF1-204ENST00000570902 IMPG1Q17R60 797 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 PGGHGQ32M88 737 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 LCA5Q86VQ0 697 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 BANPQ8N9N5 519 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 EIF1ADQ8N9N8 165 aaKnown RBP16.89■□□□□ 0.29
SCARF1-204ENST00000570902 CDRT4Q8N9R6 151 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 CEP70Q8NHQ1 597 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 HOXB13Q92826 284 aaPredicted RBP16.89■□□□□ 0.29
SCARF1-204ENST00000570902 NEUROG1Q92886 237 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 KCNA7Q96RP8 456 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 NPAS1Q99742 590 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 POTEKPQ9BYX7 375 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 GRIP2Q9C0E4 1043 aa16.89■□□□□ 0.29
SCARF1-204ENST00000570902 GJE1A6NN92 205 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 LCN1P31025 176 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 GPC1P35052 558 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 MAP3K8P41279 467 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 BSPH1Q075Z2 132 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 HSPB3Q12988 150 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 TSC22D1Q15714 1073 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 NRF1Q16656 503 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 TDRPQ86YL5 185 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 ZNF619Q8N2I2 560 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 GATSQ8NAP1 163 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 KBTBD8Q8NFY9 601 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 OR6Y1Q8NGX8 325 aa16.88■□□□□ 0.29
SCARF1-204ENST00000570902 PIWIL2Q8TC59 973 aaKnown RBP16.88■□□□□ 0.29
SCARF1-204ENST00000570902 ABHD3Q8WU67 409 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms