RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GEMIN6Q8WXD5 167 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 TTC9Q92623 222 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 UTP4Q969X6 686 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 TAMM41Q96BW9 452 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC47A1Q96FL8 570 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 SGCZQ96LD1 299 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 DMRTB1Q96MA1 342 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 PINK1Q9BXM7 581 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 GORASP2Q9H8Y8 452 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 CPNE5Q9HCH3 593 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 SDHAF3Q9NRP4 125 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 OLAHQ9NV23 265 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 ANKRD10Q9NXR5 420 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 STMN3Q9NZ72 180 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 PPP4R1LQ9P1A2 415 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 ANAPC2Q9UJX6 822 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC35A3Q9Y2D2 325 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 RRP15Q9Y3B9 282 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 DTNAQ9Y4J8 743 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 SDK2Q58EX2 2172 aa6.05□□□□□ -1.44
CTDNEP1-204ENST00000570484 PTPRBP23467 1997 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 WDR87Q6ZQQ6 2873 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 A0A087WV48 116 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRAMEF27A3QJZ7 478 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR5H15A6NDH6 313 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SERINC4A6NH21 518 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 TMEM200CA6NKL6 621 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SYT5O00445 386 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 AP3D1O14617 1153 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ACOT8O14734 319 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 HCRTR2O43614 444 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 TSPAN2O60636 221 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC25A12O75746 678 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 UGT2B17O75795 530 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRKD3O94806 890 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 NUDT14O95848 222 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 FABP3P05413 133 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 NGFRP08138 427 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 UBTFL6P0CB48 400 aaPredicted RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 RAP2AP10114 183 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 UMPSP11172 480 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 FCGR1AP12314 374 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ITGA2P17301 1181 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 CD247P20963 164 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 TBXA2RP21731 343 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ITPKBP27987 946 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 HLCSP50747 726 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SOX8P57073 446 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ACTR3P61158 418 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 DMTNQ08495 405 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 FGFBP1Q14512 234 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR1C1Q15619 314 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF141Q15928 474 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 NTRK2Q16620 822 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 MRPL2Q5T653 305 aaKnown RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRAMEF20Q5VT98 475 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 RNF220Q5VTB9 566 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 H3F3CQ6NXT2 135 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZFP1Q6P2D0 407 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 DHRS4L2Q6PKH6 230 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 DEF8Q6ZN54 512 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF836Q6ZNA1 936 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 PLEKHM3Q6ZWE6 761 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 CBLL1Q75N03 491 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZAR1Q86SH2 424 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 VRK2Q86Y07 508 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF440Q8IYI8 595 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ARMC10Q8N2F6 343 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 TMEM178AQ8NBL3 297 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 FAM98AQ8NCA5 519 aaKnown RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 PSD4Q8NDX1 1056 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR10G3Q8NGC4 313 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR4K17Q8NGC6 315 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR52E4Q8NGH9 312 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 VANGL1Q8TAA9 524 aaPredicted RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 FAM110BQ8TC76 370 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF597Q96LX8 424 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 JSRP1Q96MG2 331 aaPredicted RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 CNTNAP3BQ96NU0 1288 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SECISBP2Q96T21 854 aaKnown RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SEPHS2Q99611 448 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 DOHHQ9BU89 302 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 CNTNAP3Q9BZ76 1288 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 RNF32Q9H0A6 362 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 MAGIXQ9H6Y5 334 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 EVA1AQ9H8M9 152 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SACM1LQ9NTJ5 587 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 DCAF13Q9NV06 445 aaKnown RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 FBXO34Q9NWN3 711 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SELENONQ9NZV5 590 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 CNIH4Q9P003 139 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 LRFN1Q9P244 771 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 RPS6KB2Q9UBS0 482 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 B4GALT7Q9UBV7 327 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 KLF13Q9Y2Y9 288 aaPredicted RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 SH3GLB1Q9Y371 365 aa6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 FAM32AQ9Y421 112 aaKnown RBP6.04□□□□□ -1.44
CTDNEP1-204ENST00000570484 WIF1Q9Y5W5 379 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms