RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 BGNP21810 368 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 PRPH2P23942 346 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 RPL14P50914 215 aaKnown RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 BST1Q10588 318 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 HSPB3Q12988 150 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 ACKR1Q16570 336 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 GRAMD1BQ3KR37 738 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 ARL13AQ5H913 290 aaPredicted RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 Q5PR19 223 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 FAM214BQ7L5A3 538 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 ZNF551Q7Z340 670 aaPredicted RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 SZRD1Q7Z422 152 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 WDR75Q8IWA0 830 aaKnown RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 CDRT4Q8N9R6 151 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 ZBED6CLQ96FA7 236 aaPredicted RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 ZC3HAV1LQ96H79 300 aaKnown RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 ZNF764Q96H86 408 aaPredicted RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 CCL19Q99731 98 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 MECRQ9BV79 373 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 RTN4RQ9BZR6 473 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 KLHL4Q9C0H6 718 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 UBTD1Q9HAC8 227 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 LRTM1Q9HBL6 345 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 MRGBPQ9NV56 204 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 C1orf109Q9NX04 203 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 PAQR5Q9NXK6 330 aaPredicted RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 MCTS1Q9ULC4 181 aaKnown RBP11.8□□□□□ -0.52
SPG7-221ENST00000569720 VDAC3Q9Y277 283 aa11.8□□□□□ -0.52
SPG7-221ENST00000569720 ABCA2Q9BZC7 2435 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 GXYLT2A0PJZ3 443 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 EIF1AYO14602 144 aaKnown RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 NDUFB5O43674 189 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 NKX2-2O95096 273 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 HPGDP15428 266 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 PPP3CBP16298 524 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 DDX5P17844 614 aaKnown RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 EIF1AXP47813 144 aaKnown RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 ZNF41P51814 821 aaPredicted RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 PRKAG1P54619 331 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 MANFP55145 182 aaKnown RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 CTBP2P56545 445 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 IRX1P78414 480 aaPredicted RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 C20orf204Q6ZNR8 217 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 ZNF550Q7Z398 422 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 NUP43Q8NFH3 380 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 OR6K3Q8NGY3 331 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 PIWIL2Q8TC59 973 aaKnown RBP11.79□□□□□ -0.52
SPG7-221ENST00000569720 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 SLC9A6Q92581 669 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 ZBTB8AQ96BR9 441 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 PPCDCQ96CD2 204 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 EGLN2Q96KS0 407 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 SMR3AQ99954 134 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 REEP4Q9H6H4 257 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 SH3BP4Q9P0V3 963 aa11.79□□□□□ -0.52
SPG7-221ENST00000569720 TRPC5OSA6NMA1 111 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 ALG1L2C9J202 215 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 NPIPB8E9PQR5 432 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 AZIN1O14977 448 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 SIAH2O43255 324 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 TBX19O60806 448 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 AQP8O94778 261 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 SYNGR4O95473 234 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 OXSR1O95747 527 aaPredicted RBP11.78□□□□□ -0.52
SPG7-221ENST00000569720 IGKV1D-16P01601 117 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 NGFRP08138 427 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 ME2P23368 584 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 LCN1P31025 176 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 CCKARP32238 428 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 KIAA0040Q15053 153 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 GUSBP1Q15486 140 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 EXOC3L2Q2M3D2 409 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 TMEM44Q2T9K0 475 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 SMU1Q2TAY7 513 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 PDSS1Q5T2R2 415 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 CLEC6AQ6EIG7 209 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 ANKRD26P1Q6NSI1 321 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 PRSS57Q6UWY2 283 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 APOOLQ6UXV4 268 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 GGNQ86UU5 652 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 MISPQ8IVT2 679 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 CIDECQ96AQ7 238 aaPredicted RBP11.78□□□□□ -0.52
SPG7-221ENST00000569720 ZBTB9Q96C00 473 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 GMPPAQ96IJ6 420 aaPredicted RBP11.78□□□□□ -0.52
SPG7-221ENST00000569720 MS4A4EQ96PG1 132 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 BDH2Q9BUT1 245 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 NSRP1Q9H0G5 558 aaKnown RBP11.78□□□□□ -0.52
SPG7-221ENST00000569720 GLRX2Q9NS18 164 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 ADAM21Q9UKJ8 722 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 TMED5Q9Y3A6 229 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 FIS1Q9Y3D6 152 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 TRAF6Q9Y4K3 522 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 CCL27Q9Y4X3 112 aa11.78□□□□□ -0.52
SPG7-221ENST00000569720 SHISA8B8ZZ34 492 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 SCDO00767 359 aa11.77□□□□□ -0.53
SPG7-221ENST00000569720 AKAP10O43572 662 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms