RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 NDRG4Q9ULP0 352 aaKnown RBP11.69□□□□□ -0.54
CSPG4P13-202ENST00000567704 C5P01031 1676 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 MICAL3Q7RTP6 2002 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 JUNDP17535 347 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 MAOAP21397 527 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 DUSP6Q16828 381 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 AMZ1Q400G9 498 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 TCEAL6Q6IPX3 200 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 LEG1Q6P5S2 330 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 PXKQ7Z7A4 578 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 TTC9BQ8N6N2 239 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 GPR26Q8NDV2 337 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 FAM46BQ96A09 425 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 GMLQ99445 158 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 TCRBV5S2A0A599 114 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 HMGN2P05204 90 aaKnown RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 RAB6AP20340 208 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 CCR7P32248 378 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 CYCSP99999 105 aaKnown RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 DEFA6Q01524 100 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 IDO2Q6ZQW0 420 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC35F2Q8IXU6 374 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 LRRC25Q8N386 305 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 WDSUB1Q8N9V3 476 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR14K1Q8NGZ2 314 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 STK35Q8TDR2 534 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 YIPF6Q96EC8 236 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 TEPSINQ96N21 525 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 SFXN2Q96NB2 322 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 ALOXE3Q9BYJ1 711 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 GPR62Q9BZJ7 368 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC5A7Q9GZV3 580 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 MTHFD2LQ9H903 347 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 USP36Q9P275 1121 aaKnown RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 USP3Q9Y6I4 520 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 V9GY05 133 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 DCDC2BA2VCK2 349 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF840PA6NDX5 716 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF736B4DX44 427 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 GNRH1P01148 92 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 MTHFD2P13995 350 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 ARNTP27540 789 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 SGSHP51688 502 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 RPS27AP62979 156 aaKnown RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 UBA52P62987 128 aaKnown RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 C3orf38Q5JPI3 329 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 LY6G5CQ5SRR4 150 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR6V1Q8N148 313 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZBTB44Q8NCP5 570 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 WFIKKN2Q8TEU8 576 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 PELOQ9BRX2 385 aaKnown RBP11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 ITGB4P16144 1822 aa11.68□□□□□ -0.54
CSPG4P13-202ENST00000567704 ARAFP10398 606 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 CD1EP15812 388 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 POLR2CP19387 275 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 NDUFS1P28331 727 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SEC13P55735 322 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 P2RY14Q15391 338 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC9B2Q86UD5 537 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 TPRA1Q86W33 373 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZBTB8AQ96BR9 441 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 DDOQ99489 341 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 FN3KQ9H479 309 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 DMRT3Q9NQL9 472 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 NPIPB15A6NHN6 443 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 H2BFMP0C1H6 154 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 GP1BBP13224 206 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 S100PP25815 95 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 S100A11P31949 105 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 GPR143P51810 404 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 CLDN12P56749 244 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SP3Q02447 781 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ILKQ13418 452 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 COMTD1Q86VU5 262 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 HORMAD2Q8N7B1 307 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SDR9C7Q8NEX9 313 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR4M1Q8NGD0 313 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC7A13Q8TCU3 470 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 C3orf49Q96BT1 292 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR52D1Q9H346 318 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 APMAPQ9HDC9 416 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ATP13A2Q9NQ11 1180 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ANTXRLA6NF34 631 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC9B1P1A6NJY1 282 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 E9PI62 339 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC19A1P41440 591 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 NKX6-1P78426 367 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SIM1P81133 766 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 PEA15Q15121 130 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SAXO2Q658L1 398 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ACOT11Q8WXI4 607 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 PDLIM5Q96HC4 596 aaKnown RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SCLYQ96I15 445 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF582Q96NG8 517 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms