RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SELPP16109 830 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 LCN1P31025 176 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CLDN12P56749 244 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PCBP4P57723 403 aaKnown RBP19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TSPAN31Q12999 210 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NDUFA9Q16795 377 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 COL28A1Q2UY09 1125 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 DGLUCYQ7Z3D6 616 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR2T4Q8NH00 348 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ST8SIA2Q92186 375 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MRPL9Q9BYD2 267 aaKnown RBP19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MAB21L2Q9Y586 359 aa19.13■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CCL16O15467 120 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 FGBP02675 491 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PRKACAP17612 351 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GSTM3P21266 225 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 DUSP6Q16828 381 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ARL14Q8N4G2 192 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RFLNBQ8N5W9 214 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RPLP0P6Q8NHW5 317 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CHFRQ96EP1 664 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SFXN2Q96NB2 322 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 AMDHD1Q96NU7 426 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GSX2Q9BZM3 304 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZCCHC2Q9C0B9 1178 aaKnown RBP19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ARID1AO14497 2285 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 C7orf66A4D0T2 115 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ANTXRLA6NF34 631 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PSMD9O00233 223 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GRM6O15303 877 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MID1O15344 667 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ABLIM3O94929 683 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RRASP10301 218 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GPR1P46091 355 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZDHHC20Q5W0Z9 365 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CPXM2Q8N436 756 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZNF671Q8TAW3 534 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZNF689Q96CS4 500 aaPredicted RBP19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 IGSF21Q96ID5 467 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 C4orf36Q96KX1 117 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 KCNN2Q9H2S1 579 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CACNA1IQ9P0X4 2223 aa19.12■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OMPP47874 163 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RFX3P48380 749 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 LTB4RQ15722 352 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 HYAL4Q2M3T9 481 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 PGGHGQ32M88 737 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RASSF6Q6ZTQ3 369 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 LINGO2Q7L985 606 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZNF547Q8IVP9 402 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ESX1Q8N693 406 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RCE1Q9Y256 329 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 KIF26AQ9ULI4 1882 aaPredicted RBP19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SIX6O95475 246 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 RPLP2P05387 115 aaKnown RBP19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GKN3PP0CG01 181 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NOS3P29474 1203 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 UBE2MP61081 183 aaKnown RBP19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MELKQ14680 651 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TCTE1Q5JU00 501 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MOSPD2Q8NHP6 518 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ST8SIA4Q92187 359 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MCHR1Q99705 422 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SLC46A2Q9BY10 475 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CPEB1Q9BZB8 566 aaKnown RBP19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 C12orf10Q9HB07 376 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CAPN10Q9HC96 672 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TRABD2BA6NFA1 517 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 THY1P04216 161 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 HOXD4P09016 255 aaPredicted RBP19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GLULP15104 373 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TRAM2Q15035 370 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CD276Q5ZPR3 534 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 C18orf63Q68DL7 685 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 LRRC56Q8IYG6 542 aaPredicted RBP19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 STPG2Q8N412 459 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ABHD4Q8TB40 342 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZSWIM3Q96MP5 696 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SLC7A7Q9UM01 511 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NUBP2Q9Y5Y2 271 aa19.11■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ANKRD61A6NGH8 418 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ATF1P18846 271 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NPR2P20594 1047 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MC3RP41968 323 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ACSM3Q53FZ2 586 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 SLC25A30Q5SVS4 291 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CCNJQ5T5M9 372 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CDC73Q6P1J9 531 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 ZNF433Q8N7K0 673 aaPredicted RBP19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 OR51A7Q8NH64 312 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MS4A8Q9BY19 250 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 MRPS18AQ9NVS2 196 aaKnown RBP19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TFP02787 698 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 NAGAP17050 411 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CTRB1P17538 263 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 GRM7Q14831 915 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 TP53I3Q53FA7 332 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CLLU1Q5K131 121 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 CTRB2Q6GPI1 263 aa19.1■□□□□ 0.65
MAP1LC3B-206ENST00000564844 IKBIPQ70UQ0 350 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms