RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 THRAP10827 490 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 FBLP22087 321 aaKnown RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 GABRR2P28476 465 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 CYLC1P35663 651 aaPredicted RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 GJC1P36383 396 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 IER3P46695 156 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 CSNK1A1P48729 337 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 NUDT6P53370 316 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 HSPB3Q12988 150 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 SLC1A5Q15758 541 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 POM121L1PQ3SYA9 428 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 SLX4IPQ5VYV7 408 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 KCTD16Q68DU8 428 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 FRMPD2BQ6IN97 320 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 ZNF770Q6IQ21 691 aaPredicted RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 TCTN3Q6NUS6 607 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 TSPAN33Q86UF1 283 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 HORMAD1Q86X24 394 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 NRMQ8IXM6 262 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 SLC44A3Q8N4M1 653 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 CNBD1Q8NA66 436 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 C2CD4AQ8NCU7 369 aaPredicted RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 ADPRHL1Q8NDY3 354 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 OR9A2Q8NGT5 310 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 WDR36Q8NI36 951 aaKnown RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 MRGPRDQ8TDS7 321 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 CASKIN2Q8WXE0 1202 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 YIPF5Q969M3 257 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 SGTBQ96EQ0 304 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 MRPL48Q96GC5 212 aaKnown RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 RILPQ96NA2 401 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 ACCSQ96QU6 501 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 SLC22A12Q96S37 553 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 TRMT61BQ9BVS5 477 aaKnown RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 ENKD1Q9H0I2 346 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 IL1RL2Q9HB29 575 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 PLEKHJ1Q9NW61 149 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 SPATA6Q9NWH7 488 aaPredicted RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 USE1Q9NZ43 259 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 MYOTQ9UBF9 498 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 CDC42EP3Q9UKI2 254 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 COA3Q9Y2R0 106 aaPredicted RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 L3MBTL1Q9Y468 752 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 RIPK3Q9Y572 518 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 ABCC12Q96J65 1359 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 WDR17Q8IZU2 1322 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 FBP2O00757 339 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 LDB2O43679 373 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 SRP72O76094 671 aaKnown RBP4.4□□□□□ -1.71
SMG1-207ENST00000563235 TNFAIP8O95379 198 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 TAL1P17542 331 aaPredicted RBP4.4□□□□□ -1.71
SMG1-207ENST00000563235 SSTR2P30874 369 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 NUDT1P36639 197 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 KCNJ2P63252 427 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 MXRA7P84157 204 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 SP3Q02447 781 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 NFATC2Q13469 925 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 ZNF699Q32M78 642 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 ZNF568Q3ZCX4 644 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 GGTA1PQ4G0N0 100 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 EARS2Q5JPH6 523 aaKnown RBP4.4□□□□□ -1.71
SMG1-207ENST00000563235 LY6G6FQ5SQ64 297 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 PRAMEF17Q5VTA0 474 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 OR4F3Q6IEY1 312 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 TCEAL6Q6IPX3 200 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 ANKRD16Q6P6B7 361 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 DOK3Q7L591 496 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 DPY19L4Q7Z388 723 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 P4HA3Q7Z4N8 544 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 TBC1D26Q86UD7 250 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 CHSY1Q86X52 802 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 CRLF3Q8IUI8 442 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 MREGQ8N565 214 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 UBL4BQ8N7F7 174 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 AMER2Q8N7J2 671 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 EXD3Q8N9H8 876 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 TMEM35BQ8NCS4 154 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 TMEM52Q8NDY8 209 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 EXOSC8Q96B26 276 aaKnown RBP4.4□□□□□ -1.71
SMG1-207ENST00000563235 SCARF2Q96GP6 870 aaPredicted RBP4.4□□□□□ -1.71
SMG1-207ENST00000563235 FAM210BQ96KR6 192 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 ZNF75AQ96N20 296 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 TMEM209Q96SK2 561 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 NPAS1Q99742 590 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 C1QTNF7Q9BXJ2 289 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 CSTL1Q9H114 145 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 GSN-AS1Q9NRJ2 163 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 ABCC13Q9NSE7 274 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 ACSS1Q9NUB1 689 aaPredicted RBP4.4□□□□□ -1.71
SMG1-207ENST00000563235 EMCNQ9ULC0 261 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 ZFR2Q9UPR6 939 aaKnown RBP4.4□□□□□ -1.71
SMG1-207ENST00000563235 SH2B3Q9UQQ2 575 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 CPQQ9Y646 472 aa4.4□□□□□ -1.71
SMG1-207ENST00000563235 THSD7BQ9C0I4 1608 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 FMN2Q9NZ56 1722 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 WNK3Q9BYP7 1800 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 NEMP2A6NFY4 417 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 NKX6-3A6NJ46 265 aa4.39□□□□□ -1.71
SMG1-207ENST00000563235 UGT1A9O60656 530 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms