RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ACOT11Q8WXI4 607 aaPredicted RBP7.07□□□□□ -1.28
TCF4-216ENST00000562680 UTP4Q969X6 686 aaKnown RBP7.07□□□□□ -1.28
TCF4-216ENST00000562680 CCDC74AQ96AQ1 378 aa7.07□□□□□ -1.28
TCF4-216ENST00000562680 SLC41A3Q96GZ6 507 aa7.07□□□□□ -1.28
TCF4-216ENST00000562680 ZNF764Q96H86 408 aaPredicted RBP7.07□□□□□ -1.28
TCF4-216ENST00000562680 CCNL2Q96S94 520 aaPredicted RBP7.07□□□□□ -1.28
TCF4-216ENST00000562680 GLIPR2Q9H4G4 154 aa7.07□□□□□ -1.28
TCF4-216ENST00000562680 USP36Q9P275 1121 aaKnown RBP7.07□□□□□ -1.28
TCF4-216ENST00000562680 CD300AQ9UGN4 299 aa7.07□□□□□ -1.28
TCF4-216ENST00000562680 EBF1Q9UH73 591 aa7.07□□□□□ -1.28
TCF4-216ENST00000562680 OR2A25A4D2G3 310 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TTLL8A6PVC2 850 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 EFCAB7A8K855 629 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 NPIPB8E9PQR5 432 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 PGRMC2O15173 223 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 SCO2O43819 266 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 LCN1P31025 176 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TRHRP34981 398 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 NKX2-5P52952 324 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 KEAP1Q14145 624 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ELAVL1Q15717 326 aaKnown RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 C6orf141Q5SZD1 244 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ZNF57Q68EA5 555 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 SLC43A2Q8N370 569 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 MAL2Q969L2 176 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 SH3YL1Q96HL8 342 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 IL4I1Q96RQ9 567 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 C12orf57Q99622 126 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 UCK1Q9HA47 277 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TRIM36Q9NQ86 728 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 GRHPRQ9UBQ7 328 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 KLHL21Q9UJP4 597 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ZNF225Q9UK10 706 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 SLC22A31A6NKX4 558 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 A8MVJ9 347 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 PDCD5O14737 125 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 MYF6P23409 242 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 HOXC12P31275 282 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 NR0B1P51843 470 aaKnown RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 PMS2P3Q13401 168 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 BTBD16Q32M84 506 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 RNF175Q8N4F7 328 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 FAM160A2Q8N612 972 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 OR10Q1Q8NGQ4 319 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 OR6K6Q8NGW6 343 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 MCFD2Q8NI22 146 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TMEM80Q96HE8 168 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 IP6K3Q96PC2 410 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 FEVQ99581 238 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ZPBPQ9BS86 351 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 POLDIP3Q9BY77 421 aaKnown RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 ASB6Q9NWX5 421 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TAS2R7Q9NYW3 318 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TRIOBPQ9H2D6 2365 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 PSMD9O00233 223 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 CASKO14936 926 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TLX2O43763 284 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 LDB3O75112 727 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 DCKP27707 260 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 MAGEA2P43356 314 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 GCGRP47871 477 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ATP12AP54707 1039 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 LIM2P55344 173 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 SF3B4Q15427 424 aaKnown RBP eCLIP7.06□□□□□ -1.28
TCF4-216ENST00000562680 SLC36A3Q495N2 470 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 CYP27C1Q4G0S4 372 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 CLEC12AQ5QGZ9 265 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 AADACL4Q5VUY2 407 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TMEM71Q6P5X7 295 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 MAMSTRQ6ZN01 415 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 SLCO6A1Q86UG4 719 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 PROKR2Q8NFJ6 384 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 OR5H6Q8NGV6 325 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ELP4Q96EB1 424 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 OR4K3Q96R72 315 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TREX2Q9BQ50 279 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 SLX1AQ9BQ83 275 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 COQ3Q9NZJ6 369 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ATG4BQ9Y4P1 393 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ASB1Q9Y576 335 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ANKRD12Q6UB98 2062 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 TRAV6A0A075B6T7 132 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 A0A1W2PQF6 199 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ACOT7O00154 380 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 RAB3AP20336 220 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 PRKACGP22612 351 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 PRPS1P60891 318 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 FLI1Q01543 452 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 TIGD6Q17RP2 521 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 MAJINQ3KP22 176 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 COL13A1Q5TAT6 717 aaPredicted RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 FCRLBQ6BAA4 426 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ULK3Q6PHR2 472 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 RNF113BQ8IZP6 322 aaKnown RBP7.06□□□□□ -1.28
TCF4-216ENST00000562680 FAM86B1Q8N7N1 296 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 OR5T2Q8NGG2 359 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 CREB3L4Q8TEY5 395 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 MACROD1Q9BQ69 325 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ANKRD60Q9BZ19 345 aa7.06□□□□□ -1.28
TCF4-216ENST00000562680 ZNF696Q9H7X3 374 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms