RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 MLC1Q15049 377 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 PON3Q15166 354 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 SF3B4Q15427 424 aaKnown RBP eCLIP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 GPR68Q15743 365 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 TOMM34Q15785 309 aaPredicted RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 SGCBQ16585 318 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 FBXW10Q5XX13 1052 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 TNFAIP8L2Q6P589 184 aaPredicted RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 CBLN3Q6UW01 205 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 C6orf120Q7Z4R8 191 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 TMCO5AQ8N6Q1 288 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 FNDC9Q8TBE3 224 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 POC1BQ8TC44 478 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 HOXB13Q92826 284 aaPredicted RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 DNAJA3Q96EY1 480 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 RNF145Q96MT1 663 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 RBM24Q9BX46 236 aaKnown RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 OPN3Q9H1Y3 402 aaPredicted RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 OR51I1Q9H343 314 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 UBQLN4Q9NRR5 601 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 MED17Q9NVC6 651 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 NTMQ9P121 344 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF629Q9UEG4 869 aaPredicted RBP8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 ACTL7BQ9Y614 415 aa8.54□□□□□ -1.04
NSMCE1-203ENST00000562039 PDZD2O15018 2839 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 A0A1W2PNV4 684 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 TTC36A6NLP5 189 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 GTPBP1O00178 669 aaKnown RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 SYT5O00445 386 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 TNFSF11O14788 317 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 CXCL13O43927 109 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 RCBTB2O95199 551 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 OR12D1P0DN82 309 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 SHC1P29353 583 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 IL12AP29459 219 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 S100A3P33764 101 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 SFTPDP35247 375 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 OPRM1P35372 400 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 SLC6A8P48029 635 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF41P51814 821 aaPredicted RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF117Q03924 483 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 FOXF1Q12946 379 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 CASP8Q14790 479 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 FAM174BQ3ZCQ3 159 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 FLYWCH1Q4VC44 716 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 SLC9B1Q4ZJI4 515 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 EXOSC6Q5RKV6 272 aaKnown RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 DNAJC14Q6Y2X3 702 aaPredicted RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 BTLAQ7Z6A9 289 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 ADGRE4PQ86SQ3 457 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 B4GALNT2Q8NHY0 566 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 PNPT1Q8TCS8 783 aaKnown RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 XAGE5Q8WWM1 108 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 WNT2BQ93097 391 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF524Q96C55 264 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 STACQ99469 402 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 PIGQQ9BRB3 760 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 INPP5KQ9BT40 448 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 POLDIP3Q9BY77 421 aaKnown RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 PRRG4Q9BZD6 226 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 MANSC1Q9H8J5 431 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 DNAJB12Q9NXW2 375 aaKnown RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 GALNT8Q9NY28 637 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 NKIRAS1Q9NYS0 192 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 KCNN3Q9UGI6 736 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 MKLN1Q9UL63 735 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 PCDHGB4Q9UN71 923 aa8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 MRPS18CQ9Y3D5 142 aaKnown RBP8.53□□□□□ -1.04
NSMCE1-203ENST00000562039 TEP1Q99973 2627 aaKnown RBP8.52□□□□□ -1.04
NSMCE1-203ENST00000562039 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 A0A0J9YW62 118 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 TUBAL3A6NHL2 446 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 ANKRD28O15084 1053 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 FCMRO60667 390 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 TNFSF13O75888 250 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 AQP8O94778 261 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 NTN1O95631 604 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 TUBBP07437 444 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 IFI6P09912 130 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 CHI3L1P36222 383 aaPredicted RBP8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 CDKN2CP42773 168 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 FAM27E3Q08E93 113 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 GANABQ14697 944 aaKnown RBP8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 EXOC3L2Q2M3D2 409 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 PLPPR5Q32ZL2 321 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 PDZK1Q5T2W1 519 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 ANKRD34AQ69YU3 496 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 ZCCHC12Q6PEW1 402 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 MAVSQ7Z434 540 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 CROCCP2Q86T23 111 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 GGNQ86UU5 652 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 FBXO27Q8NI29 283 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 SFXN5Q8TD22 340 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 ROBO4Q8WZ75 1007 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 TLCD1Q96CP7 247 aa8.52□□□□□ -1.05
NSMCE1-203ENST00000562039 DTNBP1Q96EV8 351 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms