RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 OR52P1PQ8NH57 321 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 NR4A3Q92570 626 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 AP3S1Q92572 193 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MSLNLQ96KJ4 702 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 DCLRE1CQ96SD1 692 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 GTPBP2Q9BX10 602 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 RSPH9Q9H1X1 276 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MRPS18AQ9NVS2 196 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 CASKO14936 926 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 PROM1O43490 865 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 ADH1BP00325 375 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 LIMS3P0CW19 117 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 LIMS4P0CW20 117 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 PTNP21246 168 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 C5AR1P21730 350 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 PEBP1P30086 187 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MAT2AP31153 395 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 CD79BP40259 229 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 RPL35P42766 123 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 CAV3P56539 151 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 POLR2GP62487 172 aaKnown RBP eCLIP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 RPE65Q16518 533 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 DUSP6Q16828 381 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 CCNJQ5T5M9 372 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 TIGD3Q6B0B8 471 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 HSDL2Q6YN16 418 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 NKAIN4Q8IVV8 208 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 ZNF680Q8NEM1 530 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 OR4F15Q8NGB8 312 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 OR14C36Q8NHC7 312 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 DNAJA4Q8WW22 397 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 RFKQ969G6 155 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 OTULINQ96BN8 352 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MCHR1Q99705 422 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 KATNB1Q9BVA0 655 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 ACTRT3Q9BYD9 372 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 SYNPO2LQ9H987 977 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 CACYBPQ9HB71 228 aaKnown RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 NLKQ9UBE8 527 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 IL20RAQ9UHF4 553 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 A0A1W2PQU0 124 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 KDM4EB2RXH2 506 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 TOR1AO14656 332 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 FCMRO60667 390 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 CPN2P22792 545 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 GABRA5P31644 462 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 SLC1A3P43003 542 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 OMPP47874 163 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 PDX1P52945 283 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 PER3P56645 1201 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 FABP5Q01469 135 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MAB21L1Q13394 359 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 GLYR1Q49A26 553 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 COL13A1Q5TAT6 717 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 QSOX2Q6ZRP7 698 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 TMPRSS9Q7Z410 1059 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 NRROSQ86YC3 692 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 NRMQ8IXM6 262 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 YAF2Q8IY57 180 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MFSD9Q8NBP5 474 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 KCT2Q8NC54 265 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 OSTF1Q92882 214 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 FCRL4Q96PJ5 515 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 SAV1Q9H4B6 383 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 C6orf106Q9H6K1 298 aaPredicted RBP10.24□□□□□ -0.77
NEIL1-202ENST00000561643 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 COMMD3Q9UBI1 195 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 MALT1Q9UDY8 824 aa10.24□□□□□ -0.77
NEIL1-202ENST00000561643 DENND4AQ7Z401 1863 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 PRICKLE3O43900 615 aaPredicted RBP10.23□□□□□ -0.77
NEIL1-202ENST00000561643 SOX18P35713 384 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 RPS21P63220 83 aaKnown RBP10.23□□□□□ -0.77
NEIL1-202ENST00000561643 AGERQ15109 404 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 AANATQ16613 207 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.23□□□□□ -0.77
NEIL1-202ENST00000561643 PRSS42Q7Z5A4 293 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 MRGPREQ86SM8 312 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 OR4E2Q8NGC2 313 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 ACOT11Q8WXI4 607 aaPredicted RBP10.23□□□□□ -0.77
NEIL1-202ENST00000561643 ARHGAP9Q9BRR9 750 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 TMED9Q9BVK6 235 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 TBC1D17Q9HA65 648 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 SF3B6Q9Y3B4 125 aaKnown RBP10.23□□□□□ -0.77
NEIL1-202ENST00000561643 CHST2Q9Y4C5 530 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 CDH23Q9H251 3354 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 NDUFS6O75380 124 aaKnown RBP10.23□□□□□ -0.77
NEIL1-202ENST00000561643 APODP05090 189 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 TEAD1P28347 426 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 PRKAR1BP31321 381 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 FAM209BQ5JX69 171 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 ANKRD54Q6NXT1 300 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 TEX261Q6UWH6 196 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 CFAP77Q6ZQR2 320 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 GDPD1Q8N9F7 314 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 SLC16A11Q8NCK7 471 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 OR4Q3Q8NH05 313 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 PHF21AQ96BD5 680 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 SLC35A4Q96G79 324 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 ZNF681Q96N22 645 aa10.23□□□□□ -0.77
NEIL1-202ENST00000561643 MED18Q9BUE0 208 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms