RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 MMP15P51511 669 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 CPXM2Q8N436 756 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 OR51Q1Q8NH59 317 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 TLNRD1Q9H1K6 362 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 TMPRSS5Q9H3S3 457 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 LRRN3Q9H3W5 708 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 PCDHB11Q9Y5F2 797 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 PIAS3Q9Y6X2 628 aa17.93■□□□□ 0.46
SEMA4B-215ENST00000560089 KRT33AO76009 404 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 ADAP00813 363 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 HOXC4P09017 264 aaPredicted RBP17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 OR4Q2P0C623 313 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 NOS3P29474 1203 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 GMFBP60983 142 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 DYRK1AQ13627 763 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 C18orf63Q68DL7 685 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 ZNF770Q6IQ21 691 aaPredicted RBP17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 PRICKLE2Q7Z3G6 844 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 NUDT13Q86X67 352 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 THAP4Q8WY91 577 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 ZNF582Q96NG8 517 aaPredicted RBP17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 NEU1Q99519 415 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 OPN4Q9UHM6 478 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 UBXN7O94888 489 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 SLC1A3P43003 542 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 IHHQ14623 411 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 DPPA2Q7Z7J5 298 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 LHFPL3Q86UP9 236 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 CD200R1Q8TD46 325 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 PCED1BQ96HM7 432 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 XKR8Q9H6D3 395 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 PPP4R1LQ9P1A2 415 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 PCDHB10Q9UN67 800 aa17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 CARHSP1Q9Y2V2 147 aaKnown RBP17.92■□□□□ 0.46
SEMA4B-215ENST00000560089 ARRDC5A6NEK1 342 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 PCDH7O60245 1069 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 ATXN1LP0C7T5 689 aaKnown RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 EBLN1P0CF75 366 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 PITPNAQ00169 270 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 ANGPTL8Q6UXH0 198 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 RNF113BQ8IZP6 322 aaKnown RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 NAGSQ8N159 534 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 FAM26EQ8N5C1 309 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 KCTD12Q96CX2 325 aaKnown RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 CHST8Q9H2A9 424 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 GPN1Q9HCN4 374 aaPredicted RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 ACSS1Q9NUB1 689 aaPredicted RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 DZANK1Q9NVP4 752 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 LOC730098B7Z3J9 87 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 TCAPO15273 167 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 FFAR2O15552 330 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 UBL3O95164 117 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 SLC34A2O95436 690 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 ZNF35P13682 527 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 PKMP14618 531 aaKnown RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 THBS2P35442 1172 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 SKP2Q13309 424 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 IRF4Q15306 451 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 OR6V1Q8N148 313 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 OR1S2Q8NGQ3 325 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 GEMIN6Q8WXD5 167 aaKnown RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 VOPP1Q96AW1 172 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 PTGFRNQ9P2B2 879 aa17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 EXOSC1Q9Y3B2 195 aaKnown RBP17.91■□□□□ 0.46
SEMA4B-215ENST00000560089 SC5DO75845 299 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 MMP2P08253 660 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 MAPK3P27361 379 aaPredicted RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 MTNR1BP49286 362 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 CASP9P55211 416 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 RGNQ15493 299 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 CXorf57Q6NSI4 855 aaKnown RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 POMGNT2Q8NAT1 580 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 CDKN2AIPNLQ96HQ2 116 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 KLHL5Q96PQ7 755 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 OR1F2PQ96R84 312 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 CACYBPQ9HB71 228 aaKnown RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 PRDM5Q9NQX1 630 aaPredicted RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 TLR8Q9NR97 1041 aaKnown RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 CTPS2Q9NRF8 586 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 TRBV4-1A0A0J9YWV2 114 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 EFCAB14O75071 495 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 LIMS3P0CW19 117 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 LIMS4P0CW20 117 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 NQO2P16083 231 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 RBP2P50120 134 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 RAB4BP61018 213 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 MTAPQ13126 283 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 SLC29A4Q7RTT9 530 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 TPRA1Q86W33 373 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 HMGB4Q8WW32 186 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 ACOT11Q8WXI4 607 aaPredicted RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 FATE1Q969F0 183 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 ASF1BQ9NVP2 202 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 NFATC1O95644 943 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 OR12D1P0DN82 309 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 HTR2AP28223 471 aa17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 RPL3P39023 403 aaKnown RBP17.9■□□□□ 0.46
SEMA4B-215ENST00000560089 POU4F2Q12837 409 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms