RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 OR2T5Q6IEZ7 315 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 IL20RBQ6UXL0 311 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 DEF8Q6ZN54 512 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 ZNF550Q7Z398 422 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 COMTD1Q86VU5 262 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 OR10G3Q8NGC4 313 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 OR6T1Q8NGN1 323 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 OR2T29Q8NH02 315 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 CENPNQ96H22 339 aaPredicted RBP15.47■□□□□ 0.07
SNX1-203ENST00000558040 SGCZQ96LD1 299 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 NODALQ96S42 347 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 METTL7AQ9H8H3 244 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 DNAJB12Q9NXW2 375 aaKnown RBP15.47■□□□□ 0.07
SNX1-203ENST00000558040 STMN3Q9NZ72 180 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 STOML1Q9UBI4 398 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 NKX1-2Q9UD57 310 aaPredicted RBP15.47■□□□□ 0.07
SNX1-203ENST00000558040 TESQ9UGI8 421 aaKnown RBP15.47■□□□□ 0.07
SNX1-203ENST00000558040 RIMS3Q9UJD0 308 aa15.47■□□□□ 0.07
SNX1-203ENST00000558040 PRAMEF25A6NGN4 478 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 ADAMDEC1O15204 470 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 ZNF264O43296 627 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 DPM1O60762 260 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 DNAJB5O75953 348 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 UBTFL6P0CB48 400 aaPredicted RBP15.46■□□□□ 0.07
SNX1-203ENST00000558040 EIF2S3P41091 472 aaKnown RBP15.46■□□□□ 0.07
SNX1-203ENST00000558040 RNF144AP50876 292 aaPredicted RBP15.46■□□□□ 0.07
SNX1-203ENST00000558040 SESN3P58005 492 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 AGAP7PQ5VUJ5 663 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 DESI1Q6ICB0 168 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 TMEM81Q6P7N7 255 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 CCDC81Q6ZN84 652 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 RTL4Q6ZR62 310 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 MARCH3Q86UD3 253 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 LACC1Q8IV20 430 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 SPACA3Q8IXA5 215 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 LILRA2Q8N149 483 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 BEST3Q8N1M1 668 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 GATSQ8NAP1 163 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 FAM71CQ8NEG0 241 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 GRHL3Q8TE85 626 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 CNOT9Q92600 299 aaKnown RBP15.46■□□□□ 0.07
SNX1-203ENST00000558040 GATA6Q92908 595 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 AGAP4Q96P64 663 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 PIP5K1AQ99755 562 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 POLR2J2Q9GZM3 115 aaKnown RBP15.46■□□□□ 0.07
SNX1-203ENST00000558040 POLR2J3Q9H1A7 115 aaKnown RBP15.46■□□□□ 0.07
SNX1-203ENST00000558040 EXOSC3Q9NQT5 275 aaKnown RBP15.46■□□□□ 0.07
SNX1-203ENST00000558040 SDHAF3Q9NRP4 125 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 KLRF1Q9NZS2 232 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
SNX1-203ENST00000558040 EXPH5Q8NEV8 1989 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 FRS3O43559 492 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 SCO2O43819 266 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 EIF4E2O60573 245 aaKnown RBP15.45■□□□□ 0.06
SNX1-203ENST00000558040 FMO6PO60774 539 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 CYP7B1O75881 506 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 ANGPTL1O95841 491 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 UQCRBP14927 111 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 CYB561P49447 251 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 HLCSP50747 726 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 SMIM11AP58511 58 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 SNTA1Q13424 505 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 CD226Q15762 336 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 DEFB109BQ30KR1 87 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 IQCCQ4KMZ1 466 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 APOOLQ6UXV4 268 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 AMIGO2Q86SJ2 522 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 CYP4Z2PQ8N1L4 340 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 OR4D11Q8NGI4 311 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 RNF138Q8WVD3 245 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 PRRC1Q96M27 445 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 ZNF559Q9BR84 538 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 LAT2Q9GZY6 243 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 REEP1Q9H902 201 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 GPR83Q9NYM4 423 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 CNIH4Q9P003 139 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 CHCHD2Q9Y6H1 151 aaPredicted RBP15.45■□□□□ 0.06
SNX1-203ENST00000558040 CFAP54Q96N23 3096 aa15.45■□□□□ 0.06
SNX1-203ENST00000558040 DIRAS1O95057 198 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 SLC6A8P48029 635 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 ZNF136P52737 540 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 TAS2R41P59536 307 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 SPIBQ01892 262 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 OC90Q02509 493 aaPredicted RBP15.44■□□□□ 0.06
SNX1-203ENST00000558040 C17orf67Q0P5P2 114 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 SKP2Q13309 424 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 GK3PQ14409 553 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 NPTX1Q15818 432 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 SLC22A10Q63ZE4 541 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 HMBOX1Q6NT76 420 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 SLC30A6Q6NXT4 461 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 ISLR2Q6UXK2 745 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 LRRC69Q6ZNQ3 347 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 PLEKHM3Q6ZWE6 761 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 TSEN54Q7Z6J9 526 aaKnown RBP15.44■□□□□ 0.06
SNX1-203ENST00000558040 RBM45Q8IUH3 476 aaKnown RBP15.44■□□□□ 0.06
SNX1-203ENST00000558040 APLFQ8IW19 511 aaPredicted RBP15.44■□□□□ 0.06
SNX1-203ENST00000558040 TMCO5AQ8N6Q1 288 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 PAQR8Q8TEZ7 354 aa15.44■□□□□ 0.06
SNX1-203ENST00000558040 MCHR1Q99705 422 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms