RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 RASSF1Q9NS23 344 aa6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 ACSS1Q9NUB1 689 aaPredicted RBP6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 INTS9Q9NV88 658 aaKnown RBP6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 NKIRAS1Q9NYS0 192 aa6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 MED11Q9P086 117 aa6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 FRRS1LQ9P0K9 344 aa6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 DNAJC15Q9Y5T4 150 aa6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 PTGDR2Q9Y5Y4 395 aa6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 KIAA1549Q9HCM3 1950 aa6.96□□□□□ -1.3
HNRNPC-226ENST00000556628 APCP25054 2843 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 A0A1W2PRB8 838 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 GMNCA6NCL1 334 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SLC22A20A6NK97 555 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 H3BML4 177 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 PIP5K1BO14986 540 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SEC14L5O43304 696 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 HCRTR2O43614 444 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 FADS1O60427 444 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ZIC3O60481 467 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 PEX11AO75192 247 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SPAG7O75391 227 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 RGS9O75916 674 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SMNDC1O75940 238 aaKnown RBP eCLIP6.95□□□□□ -1.31e-6■□□□□ 10.8
HNRNPC-226ENST00000556628 NKX2-2O95096 273 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 UTS2O95399 124 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 PSMG1O95456 288 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 HSPA4LO95757 839 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ANGPTL1O95841 491 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 CHRNGP07510 517 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ALOX5P09917 674 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 BCKDHAP12694 445 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 LCN1P31025 176 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 CLDN18P56856 261 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 FOXF2Q12947 444 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 DAZAP2Q15038 168 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SGCBQ16585 318 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 LSM12Q3MHD2 195 aaKnown RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 GLYR1Q49A26 553 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 RFTN2Q52LD8 501 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ZNF385BQ569K4 471 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ARL13AQ5H913 290 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ZCCHC12Q6PEW1 402 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SPNS3Q6ZMD2 512 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ADGRE4PQ86SQ3 457 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 NATD1Q8N6N6 113 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 CNEP1R1Q8N9A8 125 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 CHDHQ8NE62 594 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 OR6Y1Q8NGX8 325 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 OR2T11Q8NH01 316 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 LINC01560Q8TB33 94 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 TCP10LQ8TDR4 215 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 DYDC1Q8WWB3 177 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SMPDL3BQ92485 455 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 PIK3R3Q92569 461 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 JADE3Q92613 823 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 CIDECQ96AQ7 238 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 C1GALT1C1Q96EU7 318 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 MS4A4EQ96PG1 132 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 PRPF18Q99633 342 aaKnown RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 MECRQ9BV79 373 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 PRRG4Q9BZD6 226 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 TUBB1Q9H4B7 451 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 CCDC134Q9H6E4 229 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ZCCHC3Q9NUD5 404 aaKnown RBP6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ATAD3AQ9NVI7 634 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 JKAMPQ9P055 326 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 SLC17A7Q9P2U7 560 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 CLCF1Q9UBD9 225 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 NDRG3Q9UGV2 375 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 BAIAP2L1Q9UHR4 511 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 PACSIN3Q9UKS6 424 aa6.95□□□□□ -1.3
HNRNPC-226ENST00000556628 ABCA12Q86UK0 2595 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 A0A087WZY1 265 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 A0A1W2PNV4 684 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 GXYLT2A0PJZ3 443 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 OR2M5A3KFT3 312 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 A8MXE2 369 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 TMEM233B4DJY2 109 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 ALG1L2C9J202 215 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 SCDO00767 359 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 TM9SF1O15321 606 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 GMFGO60234 142 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 SKAP2O75563 359 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 LYPLA1O75608 230 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 SOX30O94993 753 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 FAM107AO95990 144 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 KRT16P08779 473 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 ATP6V1C1P21283 382 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 ME2P23368 584 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 CPOXP36551 454 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 FRKP42685 505 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 ZNF41P51814 821 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 IST1P53990 364 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 B3GALT5-AS1P59052 145 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 SIRPAP78324 504 aa6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 POU6F2P78424 691 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 MAD2L1Q13257 205 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-226ENST00000556628 PDE7AQ13946 482 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms