RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 PAK1IP1Q9NWT1 392 aaPredicted RBP17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 PCDHGA6Q9Y5G7 932 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 GALR2O43603 387 aaPredicted RBP17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 OXSR1O95747 527 aaPredicted RBP17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 ACP1P24666 158 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 RORAP35398 523 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 OCA2Q04671 838 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 TARDBPQ13148 414 aaKnown RBP eCLIP17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 MAD2L1BPQ15013 274 aaPredicted RBP17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 ZNF385CQ66K41 422 aaPredicted RBP17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 PLEKHM3Q6ZWE6 761 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 MEX3DQ86XN8 651 aaKnown RBP17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 OR4K5Q8NGD3 323 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 FAR1Q8WVX9 515 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 SGCDQ92629 289 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 RASSF1Q9NS23 344 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 PCDHGB2Q9Y5G2 931 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 ZNF318Q5VUA4 2279 aa17.24■□□□□ 0.35
SDR39U1-218ENST00000556262 IGLV3-12A0A075B6K2 115 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 IGHV3-20A0A0C4DH32 117 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 CDX4O14627 284 aaPredicted RBP17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 FLRT2O43155 660 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 CLPXO76031 633 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 GABARAPO95166 117 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 IGFBP1P08833 259 aaPredicted RBP17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 CCDC157Q569K6 752 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 NKAIN4Q8IVV8 208 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 BMPERQ8N8U9 685 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 AGBL5Q8NDL9 886 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 PLPP5Q8NEB5 264 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 CNOT9Q92600 299 aaKnown RBP17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 RORBQ92753 470 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 PMM1Q92871 262 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 EFHD2Q96C19 240 aaPredicted RBP17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 SLC46A1Q96NT5 459 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 NXF5Q9H1B4 397 aaKnown RBP17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 C11orf16Q9NQ32 467 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 MGAT4BQ9UQ53 548 aa17.23■□□□□ 0.35
SDR39U1-218ENST00000556262 hCG_2014768A0A024R1R8 64 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 A0A087WUU8 490 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 POLR1CO15160 346 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 SLC22A1O15245 554 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 SOX14O95416 240 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 ADAP00813 363 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 GP1BAP07359 652 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 FGF5P12034 268 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 ZNF182P17025 639 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 ZNF28P17035 718 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 HTR2AP28223 471 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 GP2P55259 537 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 TEKQ02763 1124 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 EMX1Q04741 257 aaPredicted RBP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 TRA2AQ13595 282 aaKnown RBP eCLIP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 TMEM236Q5W0B7 351 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 SLC16A12Q6ZSM3 486 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 GDF7Q7Z4P5 450 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 ZER1Q7Z7L7 766 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 PARP8Q8N3A8 854 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 C7orf57Q8NEG2 295 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 RNF217Q8TC41 542 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 TRUB1Q8WWH5 349 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 DAZLQ92904 295 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 PMEPA1Q969W9 287 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 GAL3ST4Q96RP7 486 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 PHOX2BQ99453 314 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 GPA33Q99795 319 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 G6PC3Q9BUM1 346 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 UCK2Q9BZX2 261 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 NRSN2Q9GZP1 204 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 CCDC90BQ9GZT6 254 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 REV1Q9UBZ9 1251 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 IDSB3KWA1 339 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 PTGES3LE9PB15 166 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 CNOT3O75175 753 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 PTNP21246 168 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 MMP11P24347 488 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 ACVR2AP27037 513 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 POU1F1P28069 291 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 FMO3P31513 532 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 UGT2B15P54855 530 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 ST3GAL3Q11203 375 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 TMED1Q13445 227 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 IL11RAQ14626 422 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 TRAM2Q15035 370 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 Q6ZNX1 250 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 OR4C3Q8NH37 302 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 OR14A16Q8NHC5 309 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 SLC41A3Q96GZ6 507 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 DGCR6LQ9BY27 220 aa17.22■□□□□ 0.35
SDR39U1-218ENST00000556262 CDC14CA4D256 554 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 NPIPB9F8W1W9 429 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 TMX2-CTNND1H3BSU7 103 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 RGS10O43665 173 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 XPNPEP2O43895 674 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 HEXBP07686 556 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 CD59P13987 128 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 ZNF12P17014 697 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 CHMP24386 653 aa17.21■□□□□ 0.35
SDR39U1-218ENST00000556262 GGT2P36268 569 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms