RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 NPIPB9F8W1W9 429 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 KLF4O43474 513 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 PRAMEF2O60811 474 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 FAM20BO75063 409 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 KCNK2O95069 426 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 TP53P04637 393 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 CDK1P06493 297 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ANKRD34CP0C6C1 535 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 PIPP12273 146 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 POU2F1P14859 743 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 DRD5P21918 477 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 MMP11P24347 488 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 EPHA8P29322 1005 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 HOXD12P35452 270 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 STAT5AP42229 794 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 GIPRP48546 466 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 GSSP48637 474 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF136P52737 540 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 PSMD4P55036 377 aaKnown RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 RGS8P57771 180 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 EFNB1P98172 346 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 PSG6Q00889 435 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ROR2Q01974 943 aaKnown RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 SIGLEC14Q08ET2 396 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 TSPAN31Q12999 210 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 TARDBPQ13148 414 aaKnown RBP eCLIP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 EXOSC7Q15024 291 aaKnown RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF141Q15928 474 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 UBE2UQ5VVX9 321 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 RNLSQ5VYX0 342 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 Q6ZPB1 254 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 DGAT2L6Q6ZPD8 337 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 RASSF6Q6ZTQ3 369 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 WDR53Q7Z5U6 358 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 RANBP3LQ86VV4 465 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 RNF113BQ8IZP6 322 aaKnown RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 SHISA5Q8N114 240 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 FAM26EQ8N5C1 309 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 CLDN22Q8N7P3 220 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF540Q8NDQ6 660 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 OR8J1Q8NGP2 316 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 MAFAQ8NHW3 353 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 SAP25Q8TEE9 199 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 RAB2BQ8WUD1 216 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ACOT11Q8WXI4 607 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 SGCDQ92629 289 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 RORBQ92753 470 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 C12orf43Q96C57 262 aaKnown RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 MMABQ96EY8 250 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ZC3H10Q96K80 434 aaKnown RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 MCHR1Q99705 422 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 DPYSL5Q9BPU6 564 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 G6PC3Q9BUM1 346 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF768Q9H5H4 540 aaKnown RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 FOLH1BQ9HBA9 442 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 SLC25A19Q9HC21 320 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 LANCL2Q9NS86 450 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 SEMA4GQ9NTN9 838 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 CLN6Q9NWW5 311 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 HCN3Q9P1Z3 774 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 PRODH2Q9UF12 536 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 SERTAD3Q9UJW9 196 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 GMEB2Q9UKD1 530 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 HEMK1Q9Y5R4 338 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-235ENST00000556082 CACNA1IQ9P0X4 2223 aa7.68□□□□□ -1.18
ATXN3-235ENST00000556082 GOLGA4Q13439 2230 aaKnown RBP7.67□□□□□ -1.18
ATXN3-235ENST00000556082 TMEM131Q92545 1883 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 IGKV3D-11A0A0A0MRZ8 115 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 TRAPPC13A5PLN9 417 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 DSCR3O14972 297 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 FPR3P25089 353 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 LCN1P31025 176 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 CSF2RBP32927 897 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 CNR2P34972 360 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 ADMP35318 185 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 SLC15A1P46059 708 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 OMPP47874 163 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 IDH2P48735 452 aaKnown RBP7.67□□□□□ -1.18
ATXN3-235ENST00000556082 DHPSP49366 369 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-235ENST00000556082 BTG2P78543 158 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 MAT1AQ00266 395 aaKnown RBP7.67□□□□□ -1.18
ATXN3-235ENST00000556082 CDK5Q00535 292 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 PIGFQ07326 219 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF155Q12901 538 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-235ENST00000556082 IRF3Q14653 427 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 NR0B2Q15466 257 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 GPR68Q15743 365 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 MAPK14Q16539 360 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 SMN1Q16637 294 aaKnown RBP7.67□□□□□ -1.18
ATXN3-235ENST00000556082 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.67□□□□□ -1.18
ATXN3-235ENST00000556082 PLK5Q496M5 336 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 GPR107Q5VW38 600 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 MEDAGQ5VYS4 303 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 TMEM71Q6P5X7 295 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF613Q6PF04 617 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF730Q6ZMV8 503 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 QSOX2Q6ZRP7 698 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 PTCHD4Q6ZW05 846 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 MBOAT2Q6ZWT7 520 aa7.67□□□□□ -1.18
ATXN3-235ENST00000556082 GDF7Q7Z4P5 450 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms