RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 PLGP00747 810 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-219ENST00000555906 ROS1P08922 2347 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 INHBBP09529 407 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 BCKDHAP12694 445 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 HPGDP15428 266 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 PPP3CBP16298 524 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 LOXP28300 417 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-219ENST00000555906 ADSLP30566 484 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-219ENST00000555906 SERPINB4P48594 390 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 ACKR1Q16570 336 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 GALNTL6Q49A17 601 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 PPP4R4Q6NUP7 873 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 LRIG3Q6UXM1 1119 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 ESPNLQ6ZVH7 1005 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 P3H2Q8IVL5 708 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRKCH-219ENST00000555906 FAM120BQ96EK7 910 aaKnown RBP17.68■□□□□ 0.42
PRKCH-219ENST00000555906 RNF145Q96MT1 663 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 HS3ST6Q96QI5 342 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 STACQ99469 402 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 UBTD1Q9HAC8 227 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 DUSP22Q9NRW4 184 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 GLRX2Q9NS18 164 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 SIRT3Q9NTG7 399 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-219ENST00000555906 ZCCHC3Q9NUD5 404 aaKnown RBP17.68■□□□□ 0.42
PRKCH-219ENST00000555906 ATP6V1HQ9UI12 483 aa17.68■□□□□ 0.42
PRKCH-219ENST00000555906 TMEM114B3SHH9 223 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 TMEM233B4DJY2 109 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 SCAMP2O15127 329 aaKnown RBP17.67■□□□□ 0.42
PRKCH-219ENST00000555906 NPHS1O60500 1241 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 CHRNGP07510 517 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 FGF4P08620 206 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 IL11P20809 199 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 MAPK1P28482 360 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 RPL3P39023 403 aaKnown RBP17.67■□□□□ 0.42
PRKCH-219ENST00000555906 CTBP2P56545 445 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 RAC1P63000 192 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 DDIASQ8IXT1 998 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 RIBC1Q8N443 379 aaPredicted RBP17.67■□□□□ 0.42
PRKCH-219ENST00000555906 OR2V1Q8NHB1 315 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 JADE3Q92613 823 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 ZC3HAV1LQ96H79 300 aaKnown RBP17.67■□□□□ 0.42
PRKCH-219ENST00000555906 NPAS1Q99742 590 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 BTBD2Q9BX70 525 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 KLHL4Q9C0H6 718 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 PLSCR4Q9NRQ2 329 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 GIN1Q9NXP7 522 aa17.67■□□□□ 0.42
PRKCH-219ENST00000555906 PIP5K1BO14986 540 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 SYNGR4O95473 234 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 ME2P23368 584 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 ELK4P28324 431 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 POU6F2P78424 691 aaPredicted RBP17.66■□□□□ 0.42
PRKCH-219ENST00000555906 LTBQ06643 244 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 CD226Q15762 336 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 EXOC3L2Q2M3D2 409 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 UGT3A2Q3SY77 523 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 XKR7Q5GH72 579 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 CCNJQ5T5M9 372 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 CPTPQ5TA50 214 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 PRSS57Q6UWY2 283 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 BANPQ8N9N5 519 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 B4GALNT2Q8NHY0 566 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 OTUB1Q96FW1 271 aaPredicted RBP17.66■□□□□ 0.42
PRKCH-219ENST00000555906 C16orf58Q96GQ5 468 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 SH3YL1Q96HL8 342 aaPredicted RBP17.66■□□□□ 0.42
PRKCH-219ENST00000555906 COX4I2Q96KJ9 171 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 PPP3R2Q96LZ3 170 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 SMR3AQ99954 134 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 EML4Q9HC35 981 aaKnown RBP17.66■□□□□ 0.42
PRKCH-219ENST00000555906 FANCFQ9NPI8 374 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 FBXO34Q9NWN3 711 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 CLEC4AQ9UMR7 237 aa17.66■□□□□ 0.42
PRKCH-219ENST00000555906 NUP214P35658 2090 aaPredicted RBP17.66■□□□□ 0.42
PRKCH-219ENST00000555906 FAM171A2A8MVW0 826 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 TNFSF11O14788 317 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 CXCL13O43927 109 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 HMGN2P05204 90 aaKnown RBP17.65■□□□□ 0.42
PRKCH-219ENST00000555906 EFNA1P20827 205 aaPredicted RBP17.65■□□□□ 0.42
PRKCH-219ENST00000555906 ALDH3A1P30838 453 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 LASP1Q14847 261 aaKnown RBP17.65■□□□□ 0.42
PRKCH-219ENST00000555906 ARL13AQ5H913 290 aaPredicted RBP17.65■□□□□ 0.42
PRKCH-219ENST00000555906 BEX5Q5H9J7 111 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 PDSS1Q5T2R2 415 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 HBMQ6B0K9 141 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 CDC73Q6P1J9 531 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 STAC2Q6ZMT1 411 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 C22orf34Q6ZV56 151 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 MTERF4Q7Z6M4 381 aaKnown RBP17.65■□□□□ 0.42
PRKCH-219ENST00000555906 TRABD2AQ86V40 505 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 PSMA8Q8TAA3 256 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 POC1BQ8TC44 478 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 CDS1Q92903 461 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 KLHL15Q96M94 604 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 OR10A4Q9H209 315 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 PIGUQ9H490 435 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 TMEM185BQ9H7F4 350 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 ZNF395Q9H8N7 513 aaPredicted RBP17.65■□□□□ 0.42
PRKCH-219ENST00000555906 TRAF6Q9Y4K3 522 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 TLN2Q9Y4G6 2542 aa17.65■□□□□ 0.42
PRKCH-219ENST00000555906 FN1P02751 2386 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms