RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ATP5DP30049 168 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 HNRNPFP52597 415 aaKnown RBP1.86□□□□□ -2.11
SNX6-204ENST00000555541 MORF4L2Q15014 288 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 CDKN3Q16667 212 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 TSPO2Q5TGU0 170 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 RNF165Q6ZSG1 346 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 TOM1L2Q6ZVM7 507 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 FAM220AQ7Z4H9 259 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 HSD11B1LQ7Z5J1 315 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 ADAMTSL2Q86TH1 951 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 SFRP1Q8N474 314 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 TMCO5AQ8N6Q1 288 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 NEK11Q8NG66 645 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 DNAJA4Q8WW22 397 aaPredicted RBP1.86□□□□□ -2.11
SNX6-204ENST00000555541 OR1E3Q8WZA6 343 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 COG4Q9H9E3 785 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 HOMER3Q9NSC5 361 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 STOX2Q9P2F5 926 aaPredicted RBP1.86□□□□□ -2.11
SNX6-204ENST00000555541 PHF11Q9UIL8 331 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 RIMS3Q9UJD0 308 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 ZNF490Q9ULM2 529 aaPredicted RBP1.86□□□□□ -2.11
SNX6-204ENST00000555541 GMPPBQ9Y5P6 360 aa1.86□□□□□ -2.11
SNX6-204ENST00000555541 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
SNX6-204ENST00000555541 COL1A2P08123 1366 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 H0YL77 283 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 THRBP10828 461 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 GCFC2P16383 781 aaKnown RBP1.85□□□□□ -2.11
SNX6-204ENST00000555541 CSNK1DP48730 415 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 HFEQ30201 348 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 SLC39A4Q6P5W5 647 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 LEMD2Q8NC56 503 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 OR2T33Q8NG76 320 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 OR52I1Q8NGK6 324 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 PSMA8Q8TAA3 256 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 TRUB1Q8WWH5 349 aaKnown RBP1.85□□□□□ -2.11
SNX6-204ENST00000555541 SLC25A36Q96CQ1 311 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 COQ7Q99807 217 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 FTHL17Q9BXU8 183 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 NACA2Q9H009 215 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 COMMD8Q9NX08 183 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 PRPF19Q9UMS4 504 aaKnown RBP1.85□□□□□ -2.11
SNX6-204ENST00000555541 EIF3LQ9Y262 564 aaKnown RBP1.85□□□□□ -2.11
SNX6-204ENST00000555541 MAB21L2Q9Y586 359 aa1.85□□□□□ -2.11
SNX6-204ENST00000555541 KIF26AQ9ULI4 1882 aaPredicted RBP1.85□□□□□ -2.11
SNX6-204ENST00000555541 LOC100131303A0A0U1RQF7 123 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 A0A0U1RQG5 324 aaPredicted RBP1.84□□□□□ -2.11
SNX6-204ENST00000555541 SERPINE3A8MV23 424 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 RIPK2O43353 540 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 FMO6PO60774 539 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 NDUFA7O95182 113 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 BCKDHAP12694 445 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 HTR5AP47898 357 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 CARTPTQ16568 116 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 ZNF674Q2M3X9 581 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 DNAJC21Q5F1R6 531 aaKnown RBP1.84□□□□□ -2.11
SNX6-204ENST00000555541 GPR157Q5UAW9 335 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 IYDQ6PHW0 289 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 WDR74Q6RFH5 385 aaPredicted RBP1.84□□□□□ -2.11
SNX6-204ENST00000555541 UNQ9370/PRO34162Q6UXP9 181 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 TMEM61Q8N0U2 210 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 ZNF740Q8NDX6 193 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 FAM210BQ96KR6 192 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 ZNF560Q96MR9 790 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 NAP1L3Q99457 506 aaPredicted RBP1.84□□□□□ -2.11
SNX6-204ENST00000555541 RNF126Q9BV68 326 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 TBC1D10AQ9BXI6 508 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 SIRPDQ9H106 197 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 C2orf40Q9H1Z8 148 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 PRMT8Q9NR22 394 aaPredicted RBP1.84□□□□□ -2.11
SNX6-204ENST00000555541 BCAP29Q9UHQ4 241 aa1.84□□□□□ -2.11
SNX6-204ENST00000555541 IGKV1D-17A0A075B6S4 117 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 GJE1A6NN92 205 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 ZNF705EA8MWA4 302 aaPredicted RBP1.83□□□□□ -2.12
SNX6-204ENST00000555541 H3BTX0 84 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 ZBTB14O43829 449 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 HCN1O60741 890 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 UFL1O94874 794 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 KLF8O95600 359 aaPredicted RBP1.83□□□□□ -2.12
SNX6-204ENST00000555541 CSF2P04141 144 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 TBPP20226 339 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 DLSTP36957 453 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 GNPDA1P46926 289 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 NUMBP49757 651 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 ZNF136P52737 540 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 MYBPC1Q00872 1141 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 MOBPQ13875 183 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 NSDHLQ15738 373 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 TMEM52BQ4KMG9 183 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 PAGE3Q5JUK9 113 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 ARMCX2Q7L311 632 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 TMEM185AQ8NFB2 350 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 IL1F10Q8WWZ1 152 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 DEDD2Q8WXF8 326 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 EEF2KMTQ96G04 330 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 RNF185Q96GF1 192 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 FOPNLQ96NB1 174 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 DESI2Q9BSY9 194 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 TMEM121Q9BTD3 319 aa1.83□□□□□ -2.12
SNX6-204ENST00000555541 TEX13AQ9BXU3 409 aaPredicted RBP1.83□□□□□ -2.12
SNX6-204ENST00000555541 PPDPFQ9H3Y8 114 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms