RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NID1P14543 1247 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 PTDSS1P48651 473 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 CD97P48960 835 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ELOAQ14241 798 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 TRIP10Q15642 601 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ACER2Q5QJU3 275 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 TMEM179BQ7Z7N9 219 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 C17orf47Q8NEP4 570 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 OR10G3Q8NGC4 313 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ZCCHC14Q8WYQ9 949 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 CNOT9Q92600 299 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 HSPBAP1Q96EW2 488 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 VPS50Q96JG6 964 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 BARD1Q99728 777 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 SPATA5L1Q9BVQ7 753 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 HES7Q9BYE0 225 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ZNF552Q9H707 407 aaPredicted RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 BAG5Q9UL15 447 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 A0A0G2JMM0 328 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 A0A1W2PPB8 328 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 A0A1W2PRS3 328 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 TTC36A6NLP5 189 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 KIR3DP1A8MWS1 328 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 G3V3Y1 287 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 PDLIM1O00151 329 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 FFAR1O14842 300 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ACOX3O15254 700 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 GMFGO60234 142 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 PDGFAP04085 211 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 DBIP07108 87 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 FASP25445 335 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 PRKAR1BP31321 381 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ATP12AP54707 1039 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 AIMP2Q13155 320 aaKnown RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 ATP6AP1Q15904 470 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ZNF791Q3KP31 576 aaPredicted RBP9.87□□□□□ -0.83
TDP1-211ENST00000555178 ANKRD34AQ69YU3 496 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ARMC10Q8N2F6 343 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 THAP4Q8WY91 577 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 HGDQ93099 445 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 TP53INP1Q96A56 240 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 SIGLEC12Q96PQ1 595 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 ARHGDIGQ99819 225 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 CIB1Q99828 191 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 EFHD1Q9BUP0 239 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 POLE3Q9NRF9 147 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 GPR83Q9NYM4 423 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 POLHQ9Y253 713 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 TESMINQ9Y4I5 508 aa9.87□□□□□ -0.83
TDP1-211ENST00000555178 CDHR4A6H8M9 788 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 CLOCKO15516 846 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 IFNW1P05000 195 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 THBS1P07996 1170 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 UBTFL6P0CB48 400 aaPredicted RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 NRG3P56975 720 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 LARS2Q15031 903 aaKnown RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 ZNF141Q15928 474 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 NRF1Q16656 503 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 LIN52Q52LA3 116 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 IRAK1BP1Q5VVH5 260 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 DHRS4L2Q6PKH6 230 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 CLEC1AQ8NC01 280 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 OR5L2Q8NGL0 311 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 OR52J3Q8NH60 311 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 GRHL3Q8TE85 626 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 RASSF5Q8WWW0 418 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 FER1L6-AS2Q96M78 137 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 ZNF300Q96RE9 604 aaPredicted RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 TACO1Q9BSH4 297 aaKnown RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 LHPPQ9H008 270 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 PROK2Q9HC23 129 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 GALNT9Q9HCQ5 603 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 C6orf203Q9P0P8 240 aaPredicted RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 OAZ3Q9UMX2 235 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 IFT52Q9Y366 437 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 K7ENP7 123 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 SCO2O43819 266 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 PPM1BO75688 479 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 CYP7B1O75881 506 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 SOX30O94993 753 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 LDLRP01130 860 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 CCL3P10147 92 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 PTNP21246 168 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 RRM2P31350 389 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 KRT20P35900 424 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 PTGDSP41222 190 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 ZNF136P52737 540 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 PIN1Q13526 163 aaPredicted RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 FGFBP1Q14512 234 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 KLHL26Q53HC5 615 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 AP1ARQ63HQ0 302 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 SPINK14Q6IE38 97 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 OR5M10Q6IEU7 315 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 INO80CQ6PI98 192 aaPredicted RBP9.86□□□□□ -0.83
TDP1-211ENST00000555178 TBPL2Q6SJ96 375 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 CBLN3Q6UW01 205 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 MARCH3Q86UD3 253 aa9.86□□□□□ -0.83
TDP1-211ENST00000555178 TAGAPQ8N103 731 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms