RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 H0YC42 278 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 SCDO00767 359 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 BCKDKO14874 412 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 KIAA0513O60268 411 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 UGT2B17O75795 530 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 H6PDO95479 791 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 ANP32DO95626 131 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 ZCCHC18P0CG32 403 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 TROVE2P10155 538 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 ESRRAP11474 423 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 HK1P19367 917 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 ACVR2AP27037 513 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 ADH7P40394 386 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 CLK3P49761 638 aaKnown RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 TPD52P55327 224 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 DSCR4P56555 118 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 NUP107P57740 925 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 C17orf67Q0P5P2 114 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 TOMM34Q15785 309 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 NHSL2Q5HYW2 709 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 WLSQ5T9L3 541 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 RPTNQ6XPR3 784 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 C16orf62Q7Z3J2 963 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 TRIML2Q8N7C3 387 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 PHOSPHO1Q8TCT1 267 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 ABTB1Q969K4 478 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 SFXN2Q96NB2 322 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 SLC38A1Q9H2H9 487 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 TP63Q9H3D4 680 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-214ENST00000554928 RMND5AQ9H871 391 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 VAPAQ9P0L0 249 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 VDAC3Q9Y277 283 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 CARD8Q9Y2G2 431 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 PCNX3Q9H6A9 2034 aa11.19□□□□□ -0.62
SYNE2-214ENST00000554928 PTPN13Q12923 2485 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 KIAA1549Q9HCM3 1950 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 A0A096LPI6 279 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 OR2M5A3KFT3 312 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 DUXAA6NLW8 204 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 FBP2O00757 339 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 DYNC1I1O14576 645 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 STX11O75558 287 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 TOXO94900 526 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 GLI4P10075 376 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 HPGDP15428 266 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 GRNP28799 593 aaKnown RBP11.18□□□□□ -0.62
SYNE2-214ENST00000554928 LCN1P31025 176 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 LHX2P50458 406 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 CLDN15P56746 228 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SRYQ05066 204 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 LRRC74AQ0VAA2 488 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 PMPCAQ10713 525 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SELPLGQ14242 412 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 ZNF141Q15928 474 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 TMEM44Q2T9K0 475 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 ACSF3Q4G176 576 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-214ENST00000554928 GPAT3Q53EU6 434 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 RPS26P11Q5JNZ5 115 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-214ENST00000554928 LRIF1Q5T3J3 769 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 C1orf185Q5T7R7 199 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 RAET1LQ5VY80 246 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 DLEU7Q6UYE1 221 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 MRGPRGQ86SM5 289 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 IFNEQ86WN2 208 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 CCDC71Q8IV32 467 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-214ENST00000554928 POC1BQ8TC44 478 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SIKE1Q9BRV8 207 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 NMUR2Q9GZQ4 415 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 PRDM14Q9GZV8 571 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SAP130Q9H0E3 1048 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 RABEP2Q9H5N1 569 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SAR1AQ9NR31 198 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SDHAF3Q9NRP4 125 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 MED17Q9NVC6 651 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 EXD2Q9NVH0 621 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SUCOQ9UBS9 1254 aaKnown RBP11.18□□□□□ -0.62
SYNE2-214ENST00000554928 CAMK2AQ9UQM7 478 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 ZNF337Q9Y3M9 751 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 WDR45Q9Y484 360 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 DTNAQ9Y4J8 743 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 PCDHGB3Q9Y5G1 929 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 SPTAN1Q13813 2472 aaKnown RBP11.18□□□□□ -0.62
SYNE2-214ENST00000554928 ICE1Q9Y2F5 2266 aa11.18□□□□□ -0.62
SYNE2-214ENST00000554928 ASH1LQ9NR48 2969 aaKnown RBP11.17□□□□□ -0.62
SYNE2-214ENST00000554928 A0A1W2PP18 115 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 SERINC4A6NH21 518 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 CLIC1O00299 241 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 HCRTR2O43614 444 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 ADAM11O75078 769 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 KRT75O95678 551 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 AK1P00568 194 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 OPN1LWP04000 364 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 IL11P20809 199 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 CRATP43155 626 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 SUCLG1P53597 346 aaKnown RBP11.17□□□□□ -0.62
SYNE2-214ENST00000554928 CLDN18P56856 261 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 DSTNP60981 165 aa11.17□□□□□ -0.62
SYNE2-214ENST00000554928 RGNQ15493 299 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms