RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 C19orf84I3L1E1 186 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 ANKRD28O15084 1053 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 ANGPTL1O95841 491 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 CHMP24386 653 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 TIMP3P35625 211 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 CPOXP36551 454 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 PGM1P36871 562 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 ADH7P40394 386 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 CPA2P48052 419 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 HBA1P69905 142 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 POU6F2P78424 691 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-211ENST00000554310 C17orf67Q0P5P2 114 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 HSPB2Q16082 182 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 NSUN5P2Q63ZY6 315 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 OR4F3Q6IEY1 312 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 FIGNL1Q6PIW4 674 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 SEM1Q6ZVN7 128 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 MARCH3Q86UD3 253 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 ADAMTS15Q8TE58 950 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 NUDT8Q8WV74 236 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 C16orf58Q96GQ5 468 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 SPOCK3Q9BQ16 436 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 YIPF4Q9BSR8 244 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 ENKD1Q9H0I2 346 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 WDR55Q9H6Y2 383 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-211ENST00000554310 GPATCH2Q9NW75 528 aa11.85□□□□□ -0.51
SHMT2-211ENST00000554310 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 RNF103-CHMP3A0A140T963 221 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 NKX2-6A6NCS4 301 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 LINC01387J3KSC0 135 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 TOXO94900 526 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 OXSR1O95747 527 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-211ENST00000554310 COX4I1P13073 169 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 ZNF708P17019 499 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 ATP6V1C1P21283 382 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 TBXA2RP21731 343 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 MSX1P28360 303 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 EPHA3P29320 983 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 CEACAM8P31997 349 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-211ENST00000554310 WNT3P56703 355 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 MXRA7P84157 204 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 TFF3Q07654 80 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 ANXA8L1Q5VT79 327 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 GDF7Q7Z4P5 450 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 SPATA19Q7Z5L4 167 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 MISPQ8IVT2 679 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 MCEMP1Q8IX19 187 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 CLECL1Q8IZS7 167 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 VPS37AQ8NEZ2 397 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 OR5AK3PQ8NH89 298 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 ZPLD1Q8TCW7 415 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 CDS1Q92903 461 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 C1GALT1C1Q96EU7 318 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 OTUB1Q96FW1 271 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-211ENST00000554310 TREX2Q9BQ50 279 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-211ENST00000554310 RTN4RQ9BZR6 473 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 DSN1Q9H410 356 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 DENND2DQ9H6A0 471 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-211ENST00000554310 UBQLN4Q9NRR5 601 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 AIG1Q9NVV5 245 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 PCDHGB4Q9UN71 923 aa11.84□□□□□ -0.51
SHMT2-211ENST00000554310 PRSS51A0A1B0GVH4 220 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 A0A1W2PQD3 144 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 MBD3L4A6NDZ8 208 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 MBD3L3A6NE82 208 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 MBD3L5A6NJ08 208 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 SCDO00767 359 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 DVL2O14641 736 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 NDUFB5O43674 189 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 ZIC3O60481 467 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 SCN2BO60939 215 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 IL2RAP01589 272 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 ALDOCP09972 364 aaKnown RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 HPGDP15428 266 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 IGFBP2P18065 325 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 HK1P19367 917 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 LHX2P50458 406 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 CLDN18P56856 261 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 B3GALT5-AS1P59052 145 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 BCL2A1Q16548 175 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 GLYR1Q49A26 553 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 SPANXN4Q5MJ08 99 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 DCST2Q5T1A1 773 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 CCNJQ5T5M9 372 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 RAET1LQ5VY80 246 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 APOOLQ6UXV4 268 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 NET1Q7Z628 596 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 ZAR1Q86SH2 424 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 GALNT10Q86SR1 603 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 OR4A15Q8NGL6 344 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 OR4C3Q8NH37 302 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 GOT1L1Q8NHS2 421 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 MBD3L2Q8NHZ7 208 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 FBXO27Q8NI29 283 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
SHMT2-211ENST00000554310 DUSP19Q8WTR2 217 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 SLC35G5Q96KT7 338 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 TRIB1Q96RU8 372 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 TRIM8Q9BZR9 551 aa11.83□□□□□ -0.52
SHMT2-211ENST00000554310 UCK2Q9BZX2 261 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms