RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SCG5P05408 212 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 KLK1P06870 262 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 LTA4HP09960 611 aaKnown RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 HK1P19367 917 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 CSNK2A2P19784 350 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 PSMB1P20618 241 aaKnown RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 IL11P20809 199 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 SSTR1P30872 391 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 EVI2BP34910 448 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 PNLIPRP2P54317 469 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 EEFSECP57772 596 aaKnown RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 GALNT1Q10472 559 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 TRAF3Q13114 568 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 GTF2H2Q13888 395 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 EFR3AQ14156 821 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 TMEM44Q2T9K0 475 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 CTU2Q2VPK5 515 aaKnown RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 TMEM249Q2WGJ8 235 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 NCMAPQ5T1S8 102 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 FAM219BQ5XKK7 198 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 FAM180BQ6P0A1 224 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 GTF2H2CQ6P1K8 395 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 LARP4Q71RC2 724 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 COMMD6Q7Z4G1 85 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 DTX2Q86UW9 622 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 ZBED8Q8IZ13 594 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 METTL4Q8N3J2 472 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 KBTBD8Q8NFY9 601 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 OR4N2Q8NGD1 307 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 OR52B6Q8NGF0 335 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 OR5M1Q8NGP8 315 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 RHEBL1Q8TAI7 183 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 EFHD2Q96C19 240 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 KLHL29Q96CT2 875 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 C1GALT1C1Q96EU7 318 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 C11orf24Q96F05 449 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 TRMT61AQ96FX7 289 aaKnown RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 GMPPAQ96IJ6 420 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 ADGRG7Q96K78 797 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 TRAF4Q9BUZ4 470 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 DSN1Q9H410 356 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 IPPKQ9H8X2 491 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 NMRAL1Q9HBL8 299 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 FLRT3Q9NZU0 649 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 PPP4R1LQ9P1A2 415 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 CDC42EP3Q9UKI2 254 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 CLEC4AQ9UMR7 237 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 PLA2G2DQ9UNK4 145 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 LIPT1Q9Y234 373 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 ACOT9Q9Y305 439 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 RNF115Q9Y4L5 304 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 hCG_2014768A0A024R1R8 64 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 GCM2O75603 506 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 SIX3O95343 332 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 IL12BP29460 328 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 AGTR1P30556 359 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 THBS2P35442 1172 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 MAPK12P53778 367 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 ALDH18A1P54886 795 aaKnown RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 RPS3AP61247 264 aaKnown RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 PSPHP78330 225 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 VLDLRP98155 873 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 PSG6Q00889 435 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 IRF9Q00978 393 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 SRSF2Q01130 221 aaKnown RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 SLMAPQ14BN4 828 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 FXNQ16595 210 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF672Q499Z4 452 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF385BQ569K4 471 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 CCNYL2Q5T2Q4 361 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 FRG2Q64ET8 278 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 PAGE2Q7Z2X7 111 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 GABRG1Q8N1C3 465 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 SLC35F6Q8N357 371 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 OR10H5Q8NGA6 315 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 TRPC4APQ8TEL6 797 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 SMAP2Q8WU79 429 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 KCTD4Q8WVF5 259 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 GFM2Q969S9 779 aaKnown RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 S100PBPQ96BU1 408 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 TM4SF18Q96CE8 201 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 NXNL1Q96CM4 212 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 ERP27Q96DN0 273 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 FRG2BQ96QU4 278 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 TRIM2Q9C040 744 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 STMN4Q9H169 189 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-219ENST00000553488 FOLH1BQ9HBA9 442 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 MED11Q9P086 117 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 SNX12Q9UMY4 172 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 ABCG2Q9UNQ0 655 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 GPR52Q9Y2T5 361 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 ANGPTL3Q9Y5C1 460 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 AP4B1Q9Y6B7 739 aa6.47□□□□□ -1.37
ATXN3-219ENST00000553488 IGLV3-32A0A0A0MS00 114 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 A0A1W2PP18 115 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 CCDC189A1A4V9 331 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 SYCE1LA8MT33 242 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 GOLGA6L6A8MZA4 724 aa6.46□□□□□ -1.38
ATXN3-219ENST00000553488 CLOCKO15516 846 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms