RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PIF1Q9H611 641 aa10.41□□□□□ -0.74
TMEM116-218ENST00000552839 NANOGQ9H9S0 305 aa10.41□□□□□ -0.74
TMEM116-218ENST00000552839 SACM1LQ9NTJ5 587 aa10.41□□□□□ -0.74
TMEM116-218ENST00000552839 SLC13A4Q9UKG4 626 aa10.41□□□□□ -0.74
TMEM116-218ENST00000552839 WDR45Q9Y484 360 aa10.41□□□□□ -0.74
TMEM116-218ENST00000552839 HRH3Q9Y5N1 445 aa10.41□□□□□ -0.74
TMEM116-218ENST00000552839 NKX2-6A6NCS4 301 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 PRAMEF25A6NGN4 478 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 OR6C70A6NIJ9 312 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 HMGN4O00479 90 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SCO2O43819 266 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 DNAJA2O60884 412 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 KCNK2O95069 426 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 IL33O95760 270 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 ZNF24P17028 368 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 KLK2P20151 261 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SOX18P35713 384 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 PNLIPRP2P54317 469 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 KCNJ2P63252 427 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SCARB2Q14108 478 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SELPLGQ14242 412 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 GPR68Q15743 365 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 INTS11Q5TA45 600 aaKnown RBP10.4□□□□□ -0.74
TMEM116-218ENST00000552839 ZNF468Q5VIY5 522 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-218ENST00000552839 ERICH5Q6P6B1 374 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 NUP54Q7Z3B4 507 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SLC30A8Q8IWU4 369 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 MSRB3Q8IXL7 192 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 DEFB107AQ8IZN7 70 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 PGAM4Q8N0Y7 254 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 GOLM1Q8NBJ4 401 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 OR2T12Q8NG77 320 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 OR10G3Q8NGC4 313 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 LILRB4Q8NHJ6 448 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 BBS10Q8TAM1 723 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SLC26A7Q8TE54 656 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 MCUR1Q96AQ8 359 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 JSRP1Q96MG2 331 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-218ENST00000552839 TRNT1Q96Q11 434 aaKnown RBP10.4□□□□□ -0.74
TMEM116-218ENST00000552839 ZNF607Q96SK3 696 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 FOXC2Q99958 501 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 KCTD14Q9BQ13 255 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-218ENST00000552839 ZNF559Q9BR84 538 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 DOHHQ9BU89 302 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 OSBPL11Q9BXB4 747 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 HOXD1Q9GZZ0 328 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 SERHL2Q9H4I8 314 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 GSX1Q9H4S2 264 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-218ENST00000552839 HHATLQ9HCP6 504 aa10.4□□□□□ -0.74
TMEM116-218ENST00000552839 KLF13Q9Y2Y9 288 aaPredicted RBP10.4□□□□□ -0.74
TMEM116-218ENST00000552839 TRBV5-3A0A0A0MS03 114 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 A0A1B0GTH9 108 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 TMEM200CA6NKL6 621 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 FAM90A27PA6NNH2 459 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 FAM220BPB1ANY3 271 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 FAM47E-STBD1D6RA91 191 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 FXYD1O00168 92 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 GYG2O15488 501 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ICOSLGO75144 302 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 PDE9AO76083 593 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 TOXO94900 526 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 UTS2O95399 124 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 H6PDO95479 791 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 CYP4B1P13584 511 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 MSX1P28360 303 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 PTPN6P29350 595 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 LCN1P31025 176 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 PTGS2P35354 604 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 CDK6Q00534 326 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 PLGLB1Q02325 96 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 RBBP4Q09028 425 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 NTRK2Q16620 822 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ARHGAP11BQ3KRB8 267 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 SAMD4BQ5PRF9 694 aaKnown RBP10.39□□□□□ -0.75
TMEM116-218ENST00000552839 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 PRAMEF20Q5VT98 475 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 SLC22A10Q63ZE4 541 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 SERPINA11Q86U17 422 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 CD163Q86VB7 1156 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 PEX5LQ8IYB4 626 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ARHGAP24Q8N264 748 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ZNF619Q8N2I2 560 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 TMCO5AQ8N6Q1 288 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 PSD4Q8NDX1 1056 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 HIPK4Q8NE63 616 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 NFKBIDQ8NI38 313 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 FAM57AQ8TBR7 257 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 SPPL2AQ8TCT8 520 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ASB5Q8WWX0 329 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 MAL2Q969L2 176 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 TMEM19Q96HH6 336 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 SPATA5L1Q9BVQ7 753 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ALG2Q9H553 416 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 ARMC7Q9H6L4 198 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 A4GALTQ9NPC4 353 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 POLE3Q9NRF9 147 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 SDHAF3Q9NRP4 125 aa10.39□□□□□ -0.75
TMEM116-218ENST00000552839 CCM2LQ9NUG4 571 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms