RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 UROSP10746 265 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 MYL2P10916 166 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 PYGBP11216 843 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 GPC1P35052 558 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 FRKP42685 505 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-218ENST00000548945 ZNF41P51814 821 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-218ENST00000548945 DNAJB13P59910 316 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 KIAA0040Q15053 153 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 ETFDHQ16134 617 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 PLPPR5Q32ZL2 321 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 ZCCHC12Q6PEW1 402 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 HDXQ7Z353 690 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 GALNT10Q86SR1 603 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 HOMEZQ8IX15 550 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 MREGQ8N565 214 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 STEAP2Q8NFT2 490 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 OR2V1Q8NHB1 315 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 PIK3R3Q92569 461 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 ZBED6CLQ96FA7 236 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-218ENST00000548945 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 MS4A4EQ96PG1 132 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 CCT7Q99832 543 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 HDHD5Q9BXW7 423 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 ACTR6Q9GZN1 396 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 EQTNQ9NQ60 294 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 UBQLN4Q9NRR5 601 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 ACSS1Q9NUB1 689 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-218ENST00000548945 MED17Q9NVC6 651 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 EMCNQ9ULC0 261 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 CLEC4AQ9UMR7 237 aa11.49□□□□□ -0.57
PTCH1-218ENST00000548945 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 A0A1W2PQD3 144 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 GOLGA8RI6L899 631 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 ATP8B1O43520 1251 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 CXCL13O43927 109 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 GLRA3O75311 464 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 SEC22BO75396 215 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 SOX30O94993 753 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 KCNK2O95069 426 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 FAM153BP0C7A2 387 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 AGTR1P30556 359 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 EIF1P41567 113 aaKnown RBP11.48□□□□□ -0.57
PTCH1-218ENST00000548945 SERPINB4P48594 390 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 ATP5J2P56134 94 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 SLC18A2Q05940 514 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 HSPB3Q12988 150 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 CCDC153Q494R4 210 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 FAM153CQ494X1 144 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 CFAP157Q5JU67 520 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 HBMQ6B0K9 141 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 PPP4R4Q6NUP7 873 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 RNF165Q6ZSG1 346 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 TRABD2AQ86V40 505 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 NUP43Q8NFH3 380 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 SPATA3Q8NHX4 192 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 MZB1Q8WU39 189 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 SLC9A6Q92581 669 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 GIMAP5Q96F15 307 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 EGLN2Q96KS0 407 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 FCRL1Q96LA6 429 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 RNF145Q96MT1 663 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 MDFIQ99750 246 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
PTCH1-218ENST00000548945 GP6Q9HCN6 339 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 TIGARQ9NQ88 270 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 C1orf109Q9NX04 203 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 SNX8Q9Y5X2 465 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 CR1P17927 2039 aa11.48□□□□□ -0.57
PTCH1-218ENST00000548945 A0A0J9YW62 118 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 SLC28A1O00337 649 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 SCDO00767 359 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 TNFSF11O14788 317 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 RGS14O43566 566 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 GMFGO60234 142 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 PLAUP00749 431 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 PROCP04070 461 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 NEFHP12036 1026 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 NID1P14543 1247 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 HPGDP15428 266 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 ELK4P28324 431 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 MANFP55145 182 aaKnown RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 CARD18P57730 90 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 RPS4XP62701 263 aaKnown RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 PDE7AQ13946 482 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 CAPRIN1Q14444 709 aaKnown RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 CASP8Q14790 479 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 RNPS1Q15287 305 aaKnown RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 EXOSC6Q5RKV6 272 aaKnown RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 MFSD12Q6NUT3 480 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 WFDC8Q8IUA0 241 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 SLC16A11Q8NCK7 471 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 RNF128Q8TEB7 428 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 OSTF1Q92882 214 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 CIDECQ96AQ7 238 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 PPCDCQ96CD2 204 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 MTERF3Q96E29 417 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 REXO5Q96IC2 774 aaKnown RBP11.47□□□□□ -0.57
PTCH1-218ENST00000548945 KLHL15Q96M94 604 aa11.47□□□□□ -0.57
PTCH1-218ENST00000548945 TACO1Q9BSH4 297 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms