RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PRRG4Q9BZD6 226 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 C12orf49Q9H741 205 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 Q9N2J8 555 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 SDHAF3Q9NRP4 125 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 PLSCR4Q9NRQ2 329 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 DDX18Q9NVP1 670 aaKnown RBP14.72□□□□□ -0.05
SSH1-208ENST00000548522 TMEM216Q9P0N5 145 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 LAMP3Q9UQV4 416 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 SVEP1Q4LDE5 3571 aa14.72□□□□□ -0.05
SSH1-208ENST00000548522 PCNX3Q9H6A9 2034 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 CXCL13O43927 109 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 NTN1O95631 604 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 SOD3P08294 240 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 CREB1P16220 341 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 ZNF763Q0D2J5 394 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 C2orf80Q0P641 193 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 VEZF1Q14119 521 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 TSC22D1Q15714 1073 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 GATSQ8NAP1 163 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 CCDC197Q8NCU1 140 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 LILRB1Q8NHL6 650 aaPredicted RBP14.71□□□□□ -0.05
SSH1-208ENST00000548522 NEUROG1Q92886 237 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 GMPPAQ96IJ6 420 aaPredicted RBP14.71□□□□□ -0.05
SSH1-208ENST00000548522 APOPT1Q96IL0 206 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 AMDHD1Q96NU7 426 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 LMF2Q9BU23 707 aaKnown RBP14.71□□□□□ -0.05
SSH1-208ENST00000548522 TBL1XR1Q9BZK7 514 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 EQTNQ9NQ60 294 aa14.71□□□□□ -0.05
SSH1-208ENST00000548522 POLR3HQ9Y535 204 aaPredicted RBP14.71□□□□□ -0.05
SSH1-208ENST00000548522 ANK2Q01484 3957 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 TNFSF11O14788 317 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 DHRS4L1P0CG22 281 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 PPP3CBP16298 524 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 KRT4P19013 534 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 IL11P20809 199 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 GABRA3P34903 492 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 CTBP2P56545 445 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 WDR4P57081 412 aaKnown RBP14.7□□□□□ -0.06
SSH1-208ENST00000548522 PRR5P85299 388 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 OCRLQ01968 901 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 CLEC12BQ2HXU8 276 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 GLYR1Q49A26 553 aaPredicted RBP14.7□□□□□ -0.06
SSH1-208ENST00000548522 SPDYAQ5MJ70 313 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 FAM71E1Q6IPT2 247 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 MFSD12Q6NUT3 480 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 ZAR1Q86SH2 424 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 LRRC34Q8IZ02 419 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 FBXO30Q8TB52 745 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.7□□□□□ -0.06
SSH1-208ENST00000548522 S100PBPQ96BU1 408 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 ELP4Q96EB1 424 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 RNF145Q96MT1 663 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 MIEF1Q9NQG6 463 aa14.7□□□□□ -0.06
SSH1-208ENST00000548522 UBFD1O14562 309 aaKnown RBP14.69□□□□□ -0.06
SSH1-208ENST00000548522 SNX3O60493 162 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 ZNF17P17021 662 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 TAC1P20366 129 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 PSMA4P25789 261 aaKnown RBP14.69□□□□□ -0.06
SSH1-208ENST00000548522 SHC1P29353 583 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 AGTR1P30556 359 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 CDKN1AP38936 164 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 RPS4XP62701 263 aaKnown RBP14.69□□□□□ -0.06
SSH1-208ENST00000548522 C17orf67Q0P5P2 114 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 LCP2Q13094 533 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 ZNF619Q8N2I2 560 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 ANKRD42Q8N9B4 389 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 OR4C3Q8NH37 302 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 OR2V1Q8NHB1 315 aa14.69□□□□□ -0.06
SSH1-208ENST00000548522 RRP15Q9Y3B9 282 aaKnown RBP14.69□□□□□ -0.06
SSH1-208ENST00000548522 MAGED1Q9Y5V3 778 aaPredicted RBP14.69□□□□□ -0.06
SSH1-208ENST00000548522 A0A0J9YW62 118 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 A0A1W2PRB8 838 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 KLF11O14901 512 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 CLOCKO15516 846 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 VIMP08670 466 aaKnown RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 NTSP30990 170 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 CLK3P49761 638 aaKnown RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 HSPB3Q12988 150 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 ZNHIT3Q15649 155 aaPredicted RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 PLPPR5Q32ZL2 321 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 ANKRD26P1Q6NSI1 321 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 ZNF551Q7Z340 670 aaPredicted RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 WDR75Q8IWA0 830 aaKnown RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 PHC2Q8IXK0 858 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 GTPBP8Q8N3Z3 284 aaPredicted RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 POC1BQ8TC44 478 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 ABHD3Q8WU67 409 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 NANOS1Q8WY41 292 aaKnown RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 OTUB1Q96FW1 271 aaPredicted RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 SH3YL1Q96HL8 342 aaPredicted RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 GSTO2Q9H4Y5 243 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 MYNNQ9NPC7 610 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 MED17Q9NVC6 651 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 SIRT5Q9NXA8 310 aa14.68□□□□□ -0.06
SSH1-208ENST00000548522 MCTS1Q9ULC4 181 aaKnown RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 CHD3Q12873 2000 aaKnown RBP14.68□□□□□ -0.06
SSH1-208ENST00000548522 ABCA1O95477 2261 aa14.67□□□□□ -0.06
SSH1-208ENST00000548522 NBEAL1Q6ZS30 2694 aa14.67□□□□□ -0.06
SSH1-208ENST00000548522 A0A1W2PPM1 405 aa14.67□□□□□ -0.06
SSH1-208ENST00000548522 ALG1L2C9J202 215 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms