RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 A0A1B0GV50 99 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MEIS3P1A6NDR6 274 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 GABRR3A8MPY1 467 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 E7EQ34 232 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ANHXE9PGG2 379 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 H7BY64 318 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 GPX5O75715 221 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 TFP02787 698 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 LIPCP11150 499 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 CXCR2P25025 360 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 HTR7P34969 479 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ERVFC1P60507 584 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 CXCR4P61073 352 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF91Q05481 1191 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF33AQ06730 810 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ADGRF1Q5T601 910 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SIGIRRQ6IA17 410 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 C22orf34Q6ZV56 151 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 KCTD9Q7L273 389 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF627Q7L945 461 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 FAM220AQ7Z4H9 259 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SIMC1Q8NDZ2 872 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 OR10G6Q8NH81 332 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MOSPD2Q8NHP6 518 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ARRDC2Q8TBH0 407 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MYLIPQ8WY64 445 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SUSD6Q92537 303 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 RAB24Q969Q5 203 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 RHBDF1Q96CC6 855 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 MYEOVQ96EZ4 313 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZBED6CLQ96FA7 236 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 C1orf74Q96LT6 269 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 PRAP1Q96NZ9 151 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 AIF1LQ9BQI0 150 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 FOLH1BQ9HBA9 442 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 FBXO8Q9NRD0 319 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 HEBP1Q9NRV9 189 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 SLC6A13Q9NSD5 602 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 TAC3Q9UHF0 121 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 COPS3Q9UNS2 423 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 AK6Q9Y3D8 172 aaKnown RBP5.14□□□□□ -1.59
LIMA1-203ENST00000547825 INSL6Q9Y581 213 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 PRSS21Q9Y6M0 314 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF780BQ9Y6R6 833 aa5.14□□□□□ -1.59
LIMA1-203ENST00000547825 ANXA2P2A6NMY6 339 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 B8ZZF3 427 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 HHLA1C9JL84 531 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 OR7A17O14581 309 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 TOR1AO14656 332 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 AGPAT2O15120 278 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SLC16A6O15403 523 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SCN2BO60939 215 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SLC16A8O95907 504 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 IFNA6P05013 189 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 ANXA2P07355 339 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 CA3P07451 260 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 HLA-EP13747 358 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 EDNRAP25101 427 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 CD6P30203 668 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 FAUP35544 74 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SRP9P49458 86 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 ADAM8P78325 824 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF763Q0D2J5 394 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SMCO1Q147U7 214 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF630Q2M218 657 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 RTL4Q6ZR62 310 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 USP51Q70EK9 711 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 WDR53Q7Z5U6 358 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 KLHDC8BQ8IXV7 354 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SPPL3Q8TCT6 385 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 TSEN15Q8WW01 171 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SGTBQ96EQ0 304 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 MVB12AQ96EY5 273 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 DUS3LQ96G46 650 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM19Q96HH6 336 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 CNDP2Q96KP4 475 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SGCZQ96LD1 299 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 F2RL3Q96RI0 385 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 MNTQ99583 582 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 CCDC3Q9BQI4 270 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 B3GNT4Q9C0J1 378 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 FAM124BQ9H5Z6 455 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 REEP4Q9H6H4 257 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 EXO5Q9H790 373 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 SLC28A3Q9HAS3 691 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 IL26Q9NPH9 171 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 TEX10Q9NXF1 929 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 AKAP7Q9P0M2 348 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 MYEF2Q9P2K5 600 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 GNG8Q9UK08 70 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 POLR1DQ9Y2S0 133 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 MED16Q9Y2X0 877 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 ENPP4Q9Y6X5 453 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 DOCK6Q96HP0 2047 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 TCF20Q9UGU0 1960 aaKnown RBP5.13□□□□□ -1.59
LIMA1-203ENST00000547825 TRBV4-1A0A0J9YWV2 114 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 A0A1W2PRQ8 180 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 IRGMA1A4Y4 181 aa5.13□□□□□ -1.59
LIMA1-203ENST00000547825 F5H0A9 414 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms