RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ZNF366Q8N895 744 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 LINC01555Q8NAE3 123 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 OR8K5Q8NH50 307 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 FANK1Q8TC84 345 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 HAVCR2Q8TDQ0 301 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TMEM255BQ8WV15 326 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 KLK6Q92876 244 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 KISS1RQ969F8 398 aaPredicted RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 YIPF5Q969M3 257 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 MS4A6EQ96DS6 147 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ELP4Q96EB1 424 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TCEAL4Q96EI5 215 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ABHD1Q96SE0 405 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 RAB11FIP5Q9BXF6 653 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 NARFLQ9H6Q4 476 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 HCFC1R1Q9NWW0 138 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 UCKL1Q9NWZ5 548 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ABRACLQ9P1F3 81 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ZNF443Q9Y2A4 671 aaPredicted RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC27A6Q9Y2P4 619 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 WNT6Q9Y6F9 365 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TRAV1-2A0A0B4J238 106 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 IGKV1-8A0A0C4DH67 115 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 A0A0G2JN53 185 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 EDDM13A0A1B0GTR0 161 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 UNC119BA6NIH7 251 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC9B1P1A6NJY1 282 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 GPR89AB7ZAQ6 455 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 BHLHE40O14503 412 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 CTDSPLO15194 276 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 GSTZ1O43708 216 aaPredicted RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 PIP5K1CO60331 668 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ITGA10O75578 1167 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 THY1P04216 161 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 GPR89BP0CG08 455 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 POLR2CP19387 275 aaPredicted RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 ATP5A1P25705 553 aaKnown RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 METAP1P53582 386 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 DUSP2Q05923 314 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 DYRK1AQ13627 763 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ELAVL3Q14576 367 aaKnown RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 ABHD17CQ6PCB6 329 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 LYPD4Q6UWN0 246 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 IL20RBQ6UXL0 311 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 B3GLCTQ6Y288 498 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 BTN2A1Q7KYR7 527 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 KRT74Q7RTS7 529 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TIGD4Q8IY51 512 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 RNF113BQ8IZP6 322 aaKnown RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 OR8H3Q8N146 312 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 LNX2Q8N448 690 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC44A3Q8N4M1 653 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 MS4A15Q8N5U1 240 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 TMEM99Q8N816 258 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ACOT4Q8N9L9 421 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SRFBP1Q8NEF9 429 aaKnown RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 OR2L5Q8NG80 312 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC2A12Q8TD20 617 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 GIMAP5Q96F15 307 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 CLEC4MQ9H2X3 399 aaPredicted RBP8.15□□□□□ -1.1
TDP1-204ENST00000545686 OR52D1Q9H346 318 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 C12orf10Q9HB07 376 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 PRDM7Q9NQW5 492 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 NTMQ9P121 344 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SLC23A2Q9UGH3 650 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SCP2D1Q9UJQ7 156 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ACSL5Q9ULC5 683 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 ATG4BQ9Y4P1 393 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 SPEF1Q9Y4P9 236 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 IRAK3Q9Y616 596 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 NPTNQ9Y639 398 aa8.15□□□□□ -1.1
TDP1-204ENST00000545686 RPS10-NUDT3A0A1W2PQS6 291 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 FAM86C2PA6NEL3 165 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 GLOD5A6NK44 160 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 LRRN3E7EW58 273 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CDC42EP2O14613 210 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 PGRMC2O15173 223 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 PPM1DO15297 605 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ERI3O43414 337 aaKnown RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 PRKRAO75569 313 aaKnown RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 SERPINA3P01011 423 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 THBS1P07996 1170 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ZGLP1P0C6A0 271 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 MC3RP41968 323 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 RAB28P51157 221 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ERVK-21P61565 698 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ACTC1P68032 377 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ACTA1P68133 377 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 SNTA1Q13424 505 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 GSG1Q2KHT4 349 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 HNRNPA1L2Q32P51 320 aaKnown RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 CDONQ4KMG0 1287 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ARL9Q6T311 187 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 FRRS1Q6ZNA5 592 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 RANBP3LQ86VV4 465 aaPredicted RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 OR56B4Q8NH76 319 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ABHD4Q8TB40 342 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CMTM3Q96MX0 182 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms