RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SOX30O94993 753 aa8.8□□□□□ -1
YBX3-212ENST00000542002 CLDN14O95500 239 aa8.8□□□□□ -1
YBX3-212ENST00000542002 EPPINO95925 133 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ACTL6AO96019 429 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ZNF708P17019 499 aa8.8□□□□□ -1
YBX3-212ENST00000542002 IL11P20809 199 aa8.8□□□□□ -1
YBX3-212ENST00000542002 CHMP24386 653 aa8.8□□□□□ -1
YBX3-212ENST00000542002 PSMA4P25789 261 aaKnown RBP8.8□□□□□ -1
YBX3-212ENST00000542002 HTR1EP28566 365 aa8.8□□□□□ -1
YBX3-212ENST00000542002 CHI3L1P36222 383 aaPredicted RBP8.8□□□□□ -1
YBX3-212ENST00000542002 DCTP40126 519 aa8.8□□□□□ -1
YBX3-212ENST00000542002 CLK3P49761 638 aaKnown RBP8.8□□□□□ -1
YBX3-212ENST00000542002 SMSP52788 366 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ATP12AP54707 1039 aa8.8□□□□□ -1
YBX3-212ENST00000542002 PLAURQ03405 335 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ZNF117Q03924 483 aa8.8□□□□□ -1
YBX3-212ENST00000542002 GPR68Q15743 365 aa8.8□□□□□ -1
YBX3-212ENST00000542002 TOMM34Q15785 309 aaPredicted RBP8.8□□□□□ -1
YBX3-212ENST00000542002 SYPL1Q16563 259 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ZNF630Q2M218 657 aaPredicted RBP8.8□□□□□ -1
YBX3-212ENST00000542002 FLYWCH1Q4VC44 716 aa8.8□□□□□ -1
YBX3-212ENST00000542002 PAGE3Q5JUK9 113 aa8.8□□□□□ -1
YBX3-212ENST00000542002 TYW3Q6IPR3 259 aaKnown RBP8.8□□□□□ -1
YBX3-212ENST00000542002 DNAJC14Q6Y2X3 702 aaPredicted RBP8.8□□□□□ -1
YBX3-212ENST00000542002 ADGRE4PQ86SQ3 457 aa8.8□□□□□ -1
YBX3-212ENST00000542002 IFNEQ86WN2 208 aa8.8□□□□□ -1
YBX3-212ENST00000542002 MSRB3Q8IXL7 192 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ANKFN1Q8N957 763 aa8.8□□□□□ -1
YBX3-212ENST00000542002 OR10Q1Q8NGQ4 319 aa8.8□□□□□ -1
YBX3-212ENST00000542002 LILRB4Q8NHJ6 448 aa8.8□□□□□ -1
YBX3-212ENST00000542002 RND1Q92730 232 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ZNF350Q9GZX5 532 aa8.8□□□□□ -1
YBX3-212ENST00000542002 PAIP1Q9H074 479 aaKnown RBP8.8□□□□□ -1
YBX3-212ENST00000542002 SAP130Q9H0E3 1048 aa8.8□□□□□ -1
YBX3-212ENST00000542002 QRSL1Q9H0R6 528 aaKnown RBP8.8□□□□□ -1
YBX3-212ENST00000542002 SLC25A37Q9NYZ2 338 aa8.8□□□□□ -1
YBX3-212ENST00000542002 CCDC167Q9P0B6 97 aa8.8□□□□□ -1
YBX3-212ENST00000542002 DKKL1Q9UK85 242 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ICAM5Q9UMF0 924 aa8.8□□□□□ -1
YBX3-212ENST00000542002 CAMK2AQ9UQM7 478 aa8.8□□□□□ -1
YBX3-212ENST00000542002 CARD8Q9Y2G2 431 aa8.8□□□□□ -1
YBX3-212ENST00000542002 PCDHB14Q9Y5E9 798 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ICE1Q9Y2F5 2266 aa8.8□□□□□ -1
YBX3-212ENST00000542002 ADGRG4Q8IZF6 3080 aa8.79□□□□□ -1
YBX3-212ENST00000542002 OR2M5A3KFT3 312 aa8.79□□□□□ -1
YBX3-212ENST00000542002 NKX2-6A6NCS4 301 aa8.79□□□□□ -1
YBX3-212ENST00000542002 CLDN24A6NM45 220 aa8.79□□□□□ -1
YBX3-212ENST00000542002 PRSS44E7EML9 344 aa8.79□□□□□ -1
YBX3-212ENST00000542002 TNFRSF21O75509 655 aa8.79□□□□□ -1
YBX3-212ENST00000542002 STX11O75558 287 aa8.79□□□□□ -1
YBX3-212ENST00000542002 OPN1LWP04000 364 aa8.79□□□□□ -1
YBX3-212ENST00000542002 CHRM4P08173 479 aa8.79□□□□□ -1
YBX3-212ENST00000542002 KRT16P08779 473 aa8.79□□□□□ -1
YBX3-212ENST00000542002 HOXD4P09016 255 aaPredicted RBP8.79□□□□□ -1
YBX3-212ENST00000542002 LINGO3P0C6S8 592 aa8.79□□□□□ -1
YBX3-212ENST00000542002 ZCCHC18P0CG32 403 aa8.79□□□□□ -1
YBX3-212ENST00000542002 GABRA1P14867 456 aa8.79□□□□□ -1
YBX3-212ENST00000542002 CAPN3P20807 821 aa8.79□□□□□ -1
YBX3-212ENST00000542002 ATP6V1C1P21283 382 aa8.79□□□□□ -1
YBX3-212ENST00000542002 CEACAM8P31997 349 aaPredicted RBP8.79□□□□□ -1
YBX3-212ENST00000542002 CLDN20P56880 219 aa8.79□□□□□ -1
YBX3-212ENST00000542002 CHRNEQ04844 493 aa8.79□□□□□ -1
YBX3-212ENST00000542002 TFF3Q07654 80 aa8.79□□□□□ -1
YBX3-212ENST00000542002 RCAN2Q14206 197 aa8.79□□□□□ -1
YBX3-212ENST00000542002 ZNF141Q15928 474 aa8.79□□□□□ -1
YBX3-212ENST00000542002 AGKQ53H12 422 aa8.79□□□□□ -1
YBX3-212ENST00000542002 PDZK1Q5T2W1 519 aa8.79□□□□□ -1
YBX3-212ENST00000542002 NSUN5P2Q63ZY6 315 aa8.79□□□□□ -1
YBX3-212ENST00000542002 FRRS1Q6ZNA5 592 aa8.79□□□□□ -1
YBX3-212ENST00000542002 C10orf111Q8N326 155 aa8.79□□□□□ -1
YBX3-212ENST00000542002 C9orf106Q8NAJ2 232 aa8.79□□□□□ -1
YBX3-212ENST00000542002 PHOSPHO1Q8TCT1 267 aa8.79□□□□□ -1
YBX3-212ENST00000542002 ZPLD1Q8TCW7 415 aa8.79□□□□□ -1
YBX3-212ENST00000542002 ROPN1LQ96C74 230 aa8.79□□□□□ -1
YBX3-212ENST00000542002 ITCHQ96J02 903 aa8.79□□□□□ -1
YBX3-212ENST00000542002 SFXN2Q96NB2 322 aa8.79□□□□□ -1
YBX3-212ENST00000542002 TRIB1Q96RU8 372 aa8.79□□□□□ -1
YBX3-212ENST00000542002 RSPO3Q9BXY4 272 aaPredicted RBP8.79□□□□□ -1
YBX3-212ENST00000542002 NMUR2Q9GZQ4 415 aa8.79□□□□□ -1
YBX3-212ENST00000542002 HOXD1Q9GZZ0 328 aa8.79□□□□□ -1
YBX3-212ENST00000542002 ACBD3Q9H3P7 528 aa8.79□□□□□ -1
YBX3-212ENST00000542002 RUBCNLQ9H714 662 aa8.79□□□□□ -1
YBX3-212ENST00000542002 TPT1P8Q9HAU6 139 aa8.79□□□□□ -1
YBX3-212ENST00000542002 MED17Q9NVC6 651 aa8.79□□□□□ -1
YBX3-212ENST00000542002 FGFR1OP2Q9NVK5 253 aa8.79□□□□□ -1
YBX3-212ENST00000542002 VDAC3Q9Y277 283 aa8.79□□□□□ -1
YBX3-212ENST00000542002 DTNAQ9Y4J8 743 aa8.79□□□□□ -1
YBX3-212ENST00000542002 KLF2Q9Y5W3 355 aaPredicted RBP8.79□□□□□ -1
YBX3-212ENST00000542002 PTPN13Q12923 2485 aa8.79□□□□□ -1
YBX3-212ENST00000542002 CELSR2Q9HCU4 2923 aa8.79□□□□□ -1
YBX3-212ENST00000542002 NUP214P35658 2090 aaPredicted RBP8.79□□□□□ -1
YBX3-212ENST00000542002 MED12Q93074 2177 aa8.78□□□□□ -1
YBX3-212ENST00000542002 A0A0G2JND7 137 aa8.78□□□□□ -1
YBX3-212ENST00000542002 SERINC4A6NH21 518 aa8.78□□□□□ -1
YBX3-212ENST00000542002 CD8B2A6NJW9 211 aa8.78□□□□□ -1
YBX3-212ENST00000542002 ATP8B1O43520 1251 aa8.78□□□□□ -1
YBX3-212ENST00000542002 HCRTR2O43614 444 aa8.78□□□□□ -1
YBX3-212ENST00000542002 ADAM11O75078 769 aa8.78□□□□□ -1
YBX3-212ENST00000542002 H6PDO95479 791 aa8.78□□□□□ -1
YBX3-212ENST00000542002 TGM6O95932 706 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms