RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PJA1Q8NG27 643 aa15.07■□□□□ 0
VARS2-212ENST00000542001 C7orf34Q96L11 122 aa15.07■□□□□ 0
VARS2-212ENST00000542001 COMMD4Q9H0A8 199 aa15.07■□□□□ 0
VARS2-212ENST00000542001 FXYD6Q9H0Q3 95 aa15.07■□□□□ 0
VARS2-212ENST00000542001 SYNPO2LQ9H987 977 aa15.07■□□□□ 0
VARS2-212ENST00000542001 FBXL3Q9UKT7 428 aa15.07■□□□□ 0
VARS2-212ENST00000542001 NOTOA8MTQ0 251 aa15.07■□□□□ 0
VARS2-212ENST00000542001 PEX12O00623 359 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ARL6IP5O75915 188 aa15.07■□□□□ 0
VARS2-212ENST00000542001 SEMA4FO95754 770 aa15.07■□□□□ 0
VARS2-212ENST00000542001 SNTB2Q13425 540 aaKnown RBP15.07■□□□□ 0
VARS2-212ENST00000542001 ASB15Q8WXK1 588 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ZNF582Q96NG8 517 aaPredicted RBP15.07■□□□□ 0
VARS2-212ENST00000542001 DPAGT1Q9H3H5 408 aa15.07■□□□□ 0
VARS2-212ENST00000542001 GRHPRQ9UBQ7 328 aa15.07■□□□□ 0
VARS2-212ENST00000542001 LAMP5Q9UJQ1 280 aa15.07■□□□□ 0
VARS2-212ENST00000542001 ERVK-11Q9UQG0 969 aa15.07■□□□□ 0
VARS2-212ENST00000542001 MIA3Q5JRA6 1907 aa15.06■□□□□ 0
VARS2-212ENST00000542001 CXCL10P02778 98 aa15.06■□□□□ 0
VARS2-212ENST00000542001 F13BP05160 661 aa15.06■□□□□ 0
VARS2-212ENST00000542001 PEPDP12955 493 aa15.06■□□□□ 0
VARS2-212ENST00000542001 HOXA9P31269 272 aa15.06■□□□□ 0
VARS2-212ENST00000542001 TMEM44Q2T9K0 475 aa15.06■□□□□ 0
VARS2-212ENST00000542001 ABHD17CQ6PCB6 329 aa15.06■□□□□ 0
VARS2-212ENST00000542001 VWA5B2Q8N398 1253 aa15.06■□□□□ 0
VARS2-212ENST00000542001 OR1E3Q8WZA6 343 aa15.06■□□□□ 0
VARS2-212ENST00000542001 HS6ST2Q96MM7 605 aa15.06■□□□□ 0
VARS2-212ENST00000542001 MS4A4EQ96PG1 132 aa15.06■□□□□ 0
VARS2-212ENST00000542001 TMEM185BQ9H7F4 350 aa15.06■□□□□ 0
VARS2-212ENST00000542001 SLAMF7Q9NQ25 335 aa15.06■□□□□ 0
VARS2-212ENST00000542001 SEMA4GQ9NTN9 838 aa15.06■□□□□ 0
VARS2-212ENST00000542001 TAS2R10Q9NYW0 307 aa15.06■□□□□ 0
VARS2-212ENST00000542001 C17orf113A0A1B0GUU1 675 aa15.06■□□□□ 0
VARS2-212ENST00000542001 LRRN3E7EW58 273 aa15.06■□□□□ 0
VARS2-212ENST00000542001 RNF13O43567 381 aa15.06■□□□□ 0
VARS2-212ENST00000542001 CHRM4P08173 479 aa15.06■□□□□ 0
VARS2-212ENST00000542001 OR1D4P47884 311 aa15.06■□□□□ 0
VARS2-212ENST00000542001 PPP3R1P63098 170 aa15.06■□□□□ 0
VARS2-212ENST00000542001 HSD17B12Q53GQ0 312 aa15.06■□□□□ 0
VARS2-212ENST00000542001 METRNLQ641Q3 311 aa15.06■□□□□ 0
VARS2-212ENST00000542001 LIN54Q6MZP7 749 aa15.06■□□□□ 0
VARS2-212ENST00000542001 LEG1Q6P5S2 330 aa15.06■□□□□ 0
VARS2-212ENST00000542001 GPAT4Q86UL3 456 aa15.06■□□□□ 0
VARS2-212ENST00000542001 BBS1Q8NFJ9 593 aa15.06■□□□□ 0
VARS2-212ENST00000542001 OR52I1Q8NGK6 324 aa15.06■□□□□ 0
VARS2-212ENST00000542001 TNFRSF13CQ96RJ3 184 aa15.06■□□□□ 0
VARS2-212ENST00000542001 LRRN3Q9H3W5 708 aa15.06■□□□□ 0
VARS2-212ENST00000542001 SDK2Q58EX2 2172 aa15.06■□□□□ 0
VARS2-212ENST00000542001 LYRM1O43325 122 aa15.06■□□□□ 0
VARS2-212ENST00000542001 INSL4Q14641 139 aa15.06■□□□□ 0
VARS2-212ENST00000542001 DEFB133Q30KQ1 61 aa15.06■□□□□ 0
VARS2-212ENST00000542001 DCST2Q5T1A1 773 aa15.06■□□□□ 0
VARS2-212ENST00000542001 LRFN4Q6PJG9 635 aa15.06■□□□□ 0
VARS2-212ENST00000542001 TRMT10AQ8TBZ6 339 aaKnown RBP15.06■□□□□ 0
VARS2-212ENST00000542001 ASB16Q96NS5 453 aa15.06■□□□□ 0
VARS2-212ENST00000542001 HHIPQ96QV1 700 aa15.06■□□□□ 0
VARS2-212ENST00000542001 ADOQ96SZ5 270 aa15.06■□□□□ 0
VARS2-212ENST00000542001 PINK1Q9BXM7 581 aa15.06■□□□□ 0
VARS2-212ENST00000542001 OR10A4Q9H209 315 aa15.06■□□□□ 0
VARS2-212ENST00000542001 TTYH1Q9H313 450 aaPredicted RBP15.06■□□□□ 0
VARS2-212ENST00000542001 COMMD9Q9P000 198 aa15.06■□□□□ 0
VARS2-212ENST00000542001 CKLFQ9UBR5 152 aa15.06■□□□□ 0
VARS2-212ENST00000542001 CA14Q9ULX7 337 aa15.06■□□□□ 0
VARS2-212ENST00000542001 HRO43593 1189 aa15.05■□□□□ 0
VARS2-212ENST00000542001 ADAM23O75077 832 aa15.05■□□□□ 0
VARS2-212ENST00000542001 RENP00797 406 aa15.05■□□□□ 0
VARS2-212ENST00000542001 PBX2P40425 430 aa15.05■□□□□ 0
VARS2-212ENST00000542001 CTXN1P60606 82 aa15.05■□□□□ 0
VARS2-212ENST00000542001 FBXO46Q6PJ61 603 aaPredicted RBP15.05■□□□□ 0
VARS2-212ENST00000542001 ZNF547Q8IVP9 402 aa15.05■□□□□ 0
VARS2-212ENST00000542001 ZNF486Q96H40 463 aaPredicted RBP15.05■□□□□ 0
VARS2-212ENST00000542001 TBC1D24Q9ULP9 559 aa15.05■□□□□ 0
VARS2-212ENST00000542001 COQ9O75208 318 aa15.05■□□□□ -0
VARS2-212ENST00000542001 EIF2DP41214 584 aaKnown RBP15.05■□□□□ -0
VARS2-212ENST00000542001 ILKQ13418 452 aa15.05■□□□□ -0
VARS2-212ENST00000542001 CRMP1Q14194 572 aa15.05■□□□□ -0
VARS2-212ENST00000542001 OR1Q1Q15612 314 aa15.05■□□□□ -0
VARS2-212ENST00000542001 NDUFA5Q16718 116 aa15.05■□□□□ -0
VARS2-212ENST00000542001 SYT14P1Q58G82 188 aa15.05■□□□□ -0
VARS2-212ENST00000542001 GLCCI1Q86VQ1 547 aa15.05■□□□□ -0
VARS2-212ENST00000542001 SUN5Q8TC36 379 aa15.05■□□□□ -0
VARS2-212ENST00000542001 ORAI1Q96D31 301 aa15.05■□□□□ -0
VARS2-212ENST00000542001 ELP4Q96EB1 424 aa15.05■□□□□ -0
VARS2-212ENST00000542001 FYTTD1Q96QD9 318 aaKnown RBP15.05■□□□□ -0
VARS2-212ENST00000542001 LMF1Q96S06 567 aa15.05■□□□□ -0
VARS2-212ENST00000542001 ANK1P16157 1881 aa15.05■□□□□ -0
VARS2-212ENST00000542001 GXYLT2A0PJZ3 443 aa15.05■□□□□ -0
VARS2-212ENST00000542001 OTOL1A6NHN0 477 aaPredicted RBP15.05■□□□□ -0
VARS2-212ENST00000542001 RNH1P13489 461 aaKnown RBP15.05■□□□□ -0
VARS2-212ENST00000542001 HNRNPA2B1P22626 353 aaKnown RBP15.05■□□□□ -0
VARS2-212ENST00000542001 ZFP36L2P47974 494 aaKnown RBP15.05■□□□□ -0
VARS2-212ENST00000542001 GPR18Q14330 331 aa15.05■□□□□ -0
VARS2-212ENST00000542001 ARHGAP19Q14CB8 494 aa15.05■□□□□ -0
VARS2-212ENST00000542001 ZXDCQ2QGD7 858 aaPredicted RBP15.05■□□□□ -0
VARS2-212ENST00000542001 PGGHGQ32M88 737 aa15.05■□□□□ -0
VARS2-212ENST00000542001 FAM27D1Q5T7N8 215 aa15.05■□□□□ -0
VARS2-212ENST00000542001 KIAA1211LQ6NV74 962 aa15.05■□□□□ -0
VARS2-212ENST00000542001 SLC16A12Q6ZSM3 486 aa15.05■□□□□ -0
VARS2-212ENST00000542001 KRT77Q7Z794 578 aa15.05■□□□□ -0
VARS2-212ENST00000542001 FOXRED2Q8IWF2 684 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms