RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 Q9H521 79 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 KLHL28Q9NXS3 571 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 PCSK5Q92824 1860 aa25.59■■□□□ 1.69
CCM2-218ENST00000541586 C2orf92A0A1B0GVN3 265 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 FRS3O43559 492 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 CELA2AP08217 269 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 RPSAP08865 295 aaKnown RBP25.58■■□□□ 1.69
CCM2-218ENST00000541586 NID1P14543 1247 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 DRD5P21918 477 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 NFAM1Q8NET5 270 aaPredicted RBP25.58■■□□□ 1.69
CCM2-218ENST00000541586 LCORQ96JN0 433 aaPredicted RBP25.58■■□□□ 1.69
CCM2-218ENST00000541586 IMMP1LQ96LU5 166 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 GAL3ST4Q96RP7 486 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 ACAD8Q9UKU7 415 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 ACACBO00763 2458 aa25.58■■□□□ 1.69
CCM2-218ENST00000541586 FRG2CA6NGY1 282 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 OR6C76A6NM76 312 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 DENRO43583 198 aaKnown RBP25.57■■□□□ 1.68
CCM2-218ENST00000541586 GADD45GO95257 159 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 SNAP29O95721 258 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 SLC26A5P58743 744 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 MED21Q13503 144 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 EIPR1Q53HC9 387 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 CLEC1AQ8NC01 280 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 B3GNT7Q8NFL0 401 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 LMF1Q96S06 567 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 ING2Q9H160 280 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 ATP13A2Q9NQ11 1180 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 A4GNTQ9UNA3 340 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 LIMS1P48059 325 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 HMGA2P52926 109 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 DCAF7P61962 342 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.57■■□□□ 1.68
CCM2-218ENST00000541586 EXOC3L2Q2M3D2 409 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 SLC29A4Q7RTT9 530 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 WWTR1Q9GZV5 400 aa25.57■■□□□ 1.68
CCM2-218ENST00000541586 NMNAT1Q9HAN9 279 aaPredicted RBP25.57■■□□□ 1.68
CCM2-218ENST00000541586 A0A1W2PQ72 361 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 A6NL46 340 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 HS6ST1O60243 411 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 THRBP10828 461 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 ICAM2P13598 275 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 RNF144AP50876 292 aaPredicted RBP25.56■■□□□ 1.68
CCM2-218ENST00000541586 Q0VFX4 171 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 MERTKQ12866 999 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 PIN1Q13526 163 aaPredicted RBP25.56■■□□□ 1.68
CCM2-218ENST00000541586 EXT1Q16394 746 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 DECR1Q16698 335 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 COLEC12Q5KU26 742 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 RNF220Q5VTB9 566 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 TSPYL5Q86VY4 417 aaPredicted RBP25.56■■□□□ 1.68
CCM2-218ENST00000541586 TFAP2CQ92754 450 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 CRELD1Q96HD1 420 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 DHRS1Q96LJ7 313 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 ADI1Q9BV57 179 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 SEMA4CQ9C0C4 833 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 TMEFF2Q9UIK5 374 aaPredicted RBP25.56■■□□□ 1.68
CCM2-218ENST00000541586 PPIEQ9UNP9 301 aaKnown RBP25.56■■□□□ 1.68
CCM2-218ENST00000541586 PCDHGA10Q9Y5H3 936 aa25.56■■□□□ 1.68
CCM2-218ENST00000541586 RRADP55042 308 aa25.55■■□□□ 1.68
CCM2-218ENST00000541586 PDZK1Q5T2W1 519 aa25.55■■□□□ 1.68
CCM2-218ENST00000541586 MRPL2Q5T653 305 aaKnown RBP25.55■■□□□ 1.68
CCM2-218ENST00000541586 HLA-DQA1Q5Y7H0 255 aa25.55■■□□□ 1.68
CCM2-218ENST00000541586 PLAG1Q6DJT9 500 aa25.55■■□□□ 1.68
CCM2-218ENST00000541586 APCDD1LQ8NCL9 501 aa25.55■■□□□ 1.68
CCM2-218ENST00000541586 PHF10Q8WUB8 498 aaKnown RBP25.55■■□□□ 1.68
CCM2-218ENST00000541586 NPIPB9F8W1W9 429 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 TPST2O60704 377 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 ITGA3P26006 1051 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 DAPP51397 102 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 CCL11P51671 97 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 RGS8P57771 180 aaPredicted RBP25.54■■□□□ 1.68
CCM2-218ENST00000541586 FOXD4Q12950 439 aaPredicted RBP25.54■■□□□ 1.68
CCM2-218ENST00000541586 MICAQ29983 383 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 GIPC3Q8TF64 312 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 EFHD2Q96C19 240 aaPredicted RBP25.54■■□□□ 1.68
CCM2-218ENST00000541586 THOC3Q96J01 351 aaKnown RBP25.54■■□□□ 1.68
CCM2-218ENST00000541586 ZNF223Q9UK11 482 aaPredicted RBP25.54■■□□□ 1.68
CCM2-218ENST00000541586 CDHR4A6H8M9 788 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 AIMP2Q13155 320 aaKnown RBP25.54■■□□□ 1.68
CCM2-218ENST00000541586 GK3PQ14409 553 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 ZNF141Q15928 474 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 ZIK1Q3SY52 487 aaPredicted RBP25.54■■□□□ 1.68
CCM2-218ENST00000541586 ZNF441Q8N8Z8 693 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 M1APQ8TC57 530 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 PRRC1Q96M27 445 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 RDH12Q96NR8 316 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 PRR14Q9BWN1 585 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 KCNMB2Q9Y691 235 aa25.54■■□□□ 1.68
CCM2-218ENST00000541586 IL33O95760 270 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 H1F0P07305 194 aaKnown RBP25.53■■□□□ 1.68
CCM2-218ENST00000541586 ATP12AP54707 1039 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 HOXC5Q00444 222 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 RAPSNQ13702 412 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 SLC36A3Q495N2 470 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 KDM4DQ6B0I6 523 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 FAHD1Q6P587 224 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 C19orf48Q6RUI8 117 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 TAGAPQ8N103 731 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 MARVELD2Q8N4S9 558 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms