RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 FCGR1AP12314 374 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ETFAP13804 333 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 UQCRBP14927 111 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 HPGDP15428 266 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ITGA2P17301 1181 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 BMP7P18075 431 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 EFNA1P20827 205 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 PSMA4P25789 261 aaKnown RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 PRKAR1BP31321 381 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 IFNA8P32881 189 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 GABRA3P34903 492 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 EIF2S3P41091 472 aaKnown RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 GZMMP51124 257 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SSR4P51571 173 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SUMO3P55854 103 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 DUSP8Q13202 625 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 IL10RAQ13651 578 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ATP1A4Q13733 1029 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 CEACAM7Q14002 265 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 EXOSC7Q15024 291 aaKnown RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 DUSP5Q16690 384 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 GPAT3Q53EU6 434 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 CT45A2Q5DJT8 189 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ABHD17BQ5VST6 288 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 RNF220Q5VTB9 566 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 AGAP7PQ5VUJ5 663 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 FAAH2Q6GMR7 532 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 FAM180BQ6P0A1 224 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 TNFAIP8L2Q6P589 184 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 CCDC81Q6ZN84 652 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 FKBP9P1Q75LS8 142 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 NUP54Q7Z3B4 507 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 RPS19BP1Q86WX3 136 aaKnown RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 PTOV1Q86YD1 416 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ARMC8Q8IUR7 673 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC44A2Q8IWA5 706 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ZZZ3Q8IYH5 903 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ZNF440Q8IYI8 595 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ZNF619Q8N2I2 560 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC16A11Q8NCK7 471 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 TOR1AIP2Q8NFQ8 470 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 FAM110BQ8TC76 370 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 PNPT1Q8TCS8 783 aaKnown RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC26A7Q8TE54 656 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC38A5Q8WUX1 472 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 XAGE5Q8WWM1 108 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 DIO2Q92813 273 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 STMN2Q93045 179 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 UCN3Q969E3 161 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 FAM162AQ96A26 154 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 AURKBQ96GD4 344 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 TMEM19Q96HH6 336 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 MAGED4Q96JG8 741 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 COL21A1Q96P44 957 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 AGAP4Q96P64 663 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 GAL3ST4Q96RP7 486 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 TREX2Q9BQ50 279 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 NUDT9Q9BW91 350 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 UGT2B28Q9BY64 529 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 CNTD2Q9H8S5 307 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 AKIRIN1Q9H9L7 192 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ZNF160Q9HCG1 818 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SDHAF3Q9NRP4 125 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 UBQLN4Q9NRR5 601 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC6A13Q9NSD5 602 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 CNIH4Q9P003 139 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SEC14L3Q9UDX4 400 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 IL17BQ9UHF5 180 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC7A8Q9UHI5 535 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC13A4Q9UKG4 626 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 ERVK-11Q9UQG0 969 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 POMPQ9Y244 141 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC35A3Q9Y2D2 325 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 SLC9A8Q9Y2E8 581 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 PCDHGB6Q9Y5F9 930 aa5.28□□□□□ -1.56
CDKN3-206ENST00000541304 KMT2BQ9UMN6 2715 aaPredicted RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 RIF1Q5UIP0 2472 aaKnown RBP5.28□□□□□ -1.56
CDKN3-206ENST00000541304 DMDP11532 3685 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 AGAP5A6NIR3 686 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 A8MUA0 341 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 H0YHG0 523 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 K7ENP7 123 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 SCDO00767 359 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 ARPC2O15144 300 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 SUV39H1O43463 412 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 FMO6PO60774 539 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 FKBP6O75344 327 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 ITGA10O75578 1167 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 KCNK2O95069 426 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 H6PDO95479 791 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 IMPDH2P12268 514 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 PRKCAP17252 672 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 TBXA2RP21731 343 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 RPS4Y1P22090 263 aaKnown RBP5.27□□□□□ -1.57
CDKN3-206ENST00000541304 F8A1P23610 371 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 ITGA3P26006 1051 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 ABCD3P28288 659 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 KDELR2P33947 212 aa5.27□□□□□ -1.57
CDKN3-206ENST00000541304 NR0B1P51843 470 aaKnown RBP5.27□□□□□ -1.57
CDKN3-206ENST00000541304 EFNA3P52797 238 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms