RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 EVI2BP34910 448 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 PTGDSP41222 190 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 KCNJ5P48544 419 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 CYB561P49447 251 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 TMED10P49755 219 aaKnown RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 GAS1P54826 345 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 SELENOWP63302 87 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 EEF1A1P68104 462 aaKnown RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 KCNJ10P78508 379 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 OC90Q02509 493 aaPredicted RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 PLAURQ03405 335 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 MFAP5Q13361 173 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 CD226Q15762 336 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 NDUFAF6Q330K2 333 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 PRAMEF20Q5VT98 475 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 FNDC7Q5VTL7 733 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 SPINK14Q6IE38 97 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 EIF3MQ7L2H7 374 aaKnown RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 SPATA24Q86W54 205 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 LSRQ86X29 649 aaPredicted RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 KRT73Q86Y46 540 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 PEX5LQ8IYB4 626 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 CYP4Z2PQ8N1L4 340 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 POGLUT1Q8NBL1 392 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 CATSPER1Q8NEC5 780 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 SPPL2AQ8TCT8 520 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 SLC26A7Q8TE54 656 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 RNF138Q8WVD3 245 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 SNRNP27Q8WVK2 155 aaKnown RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 CNOT9Q92600 299 aaKnown RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 TTC9Q92623 222 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 PMM1Q92871 262 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 TMCO6Q96DC7 493 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 TPD52L3Q96J77 140 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 LRGUKQ96M69 825 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 KLHDC3Q9BQ90 382 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 UTP23Q9BRU9 249 aaKnown RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 HES7Q9BYE0 225 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 HOXD1Q9GZZ0 328 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 MUC13Q9H3R2 512 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 DENND2DQ9H6A0 471 aaPredicted RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 PROK2Q9HC23 129 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 GALNT9Q9HCQ5 603 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 UBQLN4Q9NRR5 601 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 LRFN1Q9P244 771 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 SEC14L3Q9UDX4 400 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 CNOT11Q9UKZ1 510 aaKnown RBP8.55□□□□□ -1.04
DDX55-208ENST00000541259 DTNAQ9Y4J8 743 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 HRH3Q9Y5N1 445 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 CSAG2Q9Y5P2 127 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 PIEZO2Q9H5I5 2752 aa8.55□□□□□ -1.04
DDX55-208ENST00000541259 BSNQ9UPA5 3926 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 A0A0G2JMM0 328 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 A0A1W2PPB8 328 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 A0A1W2PRS3 328 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 TCRBV3S1A0A5B6 114 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 SERINC4A6NH21 518 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 KIR3DP1A8MWS1 328 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 B4DXG7 233 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 ALG1L2C9J202 215 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 SCDO00767 359 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 TP53I11O14683 189 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 SUV39H1O43463 412 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 FRS3O43559 492 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 NEURL1O76050 574 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 ANGPTL1O95841 491 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 IFNA14P01570 189 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 PDGFAP04085 211 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 FESP07332 822 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 NGFRP08138 427 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 HPGDP15428 266 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 LCN1P31025 176 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 CASP3P42574 277 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 OR1E2P47887 323 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 CD97P48960 835 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 ACTR3P61158 418 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 FGFBP1Q14512 234 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 LARS2Q15031 903 aaKnown RBP8.54□□□□□ -1.04
DDX55-208ENST00000541259 OR1C1Q15619 314 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 INPP5JQ15735 1006 aaPredicted RBP8.54□□□□□ -1.04
DDX55-208ENST00000541259 LINC00303Q3SY05 128 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 LIN52Q52LA3 116 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 MRPL2Q5T653 305 aaKnown RBP8.54□□□□□ -1.04
DDX55-208ENST00000541259 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 DHRS4L2Q6PKH6 230 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 C19orf48Q6RUI8 117 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 IGFL2Q6UWQ7 119 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 RTL4Q6ZR62 310 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 RBM45Q8IUH3 476 aaKnown RBP8.54□□□□□ -1.04
DDX55-208ENST00000541259 LACC1Q8IV20 430 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 OR52E4Q8NGH9 312 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 OR4D11Q8NGI4 311 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 PHOSPHO1Q8TCT1 267 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 PAQR8Q8TEZ7 354 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 HAS2Q92819 552 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 NTNG2Q96CW9 530 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 HSH2DQ96JZ2 352 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 SEPHS2Q99611 448 aa8.54□□□□□ -1.04
DDX55-208ENST00000541259 SMAD5Q99717 465 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms