RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SFXN4Q6P4A7 337 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 LRRC28Q86X40 367 aaPredicted RBP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 OR4D9Q8NGE8 314 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 TRMT10AQ8TBZ6 339 aaKnown RBP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 UBQLN3Q9H347 655 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 BABAM2Q9NXR7 383 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 ELF5Q9UKW6 265 aaPredicted RBP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 TEX13CA0A0J9YWL9 993 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 HNRNPA1P09651 372 aaKnown RBP eCLIP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 CLUP10909 449 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 PAICSP22234 425 aaKnown RBP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 CERS1P27544 350 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 RPA4Q13156 261 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 CEACAM19Q7Z692 300 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 IZUMO1Q8IYV9 350 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 C7orf61Q8IZ16 206 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 OR2T33Q8NG76 320 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 SLC41A3Q96GZ6 507 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 LINC00615Q96LM1 132 aaPredicted RBP18.91■□□□□ 0.62
TMEM260-203ENST00000539559 ARHGDIGQ99819 225 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 OR51V1Q9H2C8 321 aa18.91■□□□□ 0.62
TMEM260-203ENST00000539559 AIFM1O95831 613 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 DHFRP00374 187 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 PTBP1P26599 531 aaKnown RBP eCLIP18.9■□□□□ 0.62
TMEM260-203ENST00000539559 BCL6P41182 706 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 RPS7P62081 194 aaKnown RBP18.9■□□□□ 0.62
TMEM260-203ENST00000539559 DGCR2P98153 550 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 SLC36A2Q495M3 483 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 C16orf62Q7Z3J2 963 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 OAFQ86UD1 273 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 ACBD7Q8N6N7 88 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 NUP43Q8NFH3 380 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 ACOT11Q8WXI4 607 aaPredicted RBP18.9■□□□□ 0.62
TMEM260-203ENST00000539559 ORAI3Q9BRQ5 295 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 MTIF3Q9H2K0 278 aaKnown RBP18.9■□□□□ 0.62
TMEM260-203ENST00000539559 OR51J1Q9H342 316 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 HEXA-AS1Q9H8Q6 139 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 MRPL15Q9P015 296 aaKnown RBP18.9■□□□□ 0.62
TMEM260-203ENST00000539559 DAPL1A0PJW8 107 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 PRRT4C9JH25 899 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 DRD5P21918 477 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 BTG1P62324 171 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 CAMK1Q14012 370 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 PRSS45Q7RTY3 260 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 SIAH3Q8IW03 269 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 OR5W2Q8NH69 310 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 COL26A1Q96A83 441 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 SCMH1Q96GD3 660 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 NKIRAS2Q9NYR9 191 aa18.9■□□□□ 0.62
TMEM260-203ENST00000539559 C5orf67F2Z3F1 127 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 TCRBP04435 133 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 FPR3P25089 353 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 ACSL1P33121 698 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 MTNR1BP49286 362 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 SLC9A5Q14940 896 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 MLC1Q15049 377 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 TCEA2Q15560 299 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 SPRED2Q7Z698 418 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 ZNF687Q8N1G0 1237 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 LRRC20Q8TCA0 184 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 C12orf66Q96MD2 445 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 LRRC3BQ96PB8 259 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 FBXL4Q9UKA2 621 aa18.89■□□□□ 0.62
TMEM260-203ENST00000539559 FZD7O75084 574 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 SOX30O94993 753 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 MT-ND4P03905 459 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 ADRB3P13945 408 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 SNRPBP14678 240 aaKnown RBP18.89■□□□□ 0.61
TMEM260-203ENST00000539559 NDUFV2P19404 249 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 FXYD6P3P58550 94 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 ST8SIA6P61647 398 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 SNRPNP63162 240 aaKnown RBP18.89■□□□□ 0.61
TMEM260-203ENST00000539559 CCNJQ5T5M9 372 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 ACOT4Q8N9L9 421 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 SLC16A11Q8NCK7 471 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 PFN4Q8NHR9 129 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 CAMK1GQ96NX5 476 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 FERD3LQ96RJ6 166 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 KCNN2Q9H2S1 579 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 C20orf141Q9NUB4 165 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 GPR34Q9UPC5 381 aa18.89■□□□□ 0.61
TMEM260-203ENST00000539559 J3QLW9 94 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 PDGFAP04085 211 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 GYPBP06028 91 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 PRG2P13727 222 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 ZNF19P17023 458 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 STAT5AP42229 794 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 ZNF81P51508 661 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 ACSM1Q08AH1 577 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 GRASPQ7Z6J2 395 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 KIAA0907Q7Z7F0 614 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 UBL7Q96S82 380 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 FAIM2Q9BWQ8 316 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 NT5DC2Q9H857 520 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 EIF3KQ9UBQ5 218 aaKnown RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 KCNN3Q9UGI6 736 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 ASB4Q9Y574 426 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 J3QRE1 110 aa18.88■□□□□ 0.61
TMEM260-203ENST00000539559 NARSO43776 548 aaKnown RBP18.88■□□□□ 0.61
TMEM260-203ENST00000539559 RAF1P04049 648 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms