RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 KLHL26Q53HC5 615 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TTMPQ5BVD1 217 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF628Q5EBL2 1059 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 FAM91A1Q658Y4 838 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 KIRREL2Q6UWL6 708 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 LRRC74BQ6ZQY2 392 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SLC16A12Q6ZSM3 486 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 EIF3MQ7L2H7 374 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 VASH2Q86V25 355 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PRSS58Q8IYP2 241 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 OR8J3Q8NGG0 315 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 OR52N1Q8NH53 320 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ESAMQ96AP7 390 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 MCUR1Q96AQ8 359 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZBTB8AQ96BR9 441 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 FAM120BQ96EK7 910 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 GAL3ST4Q96RP7 486 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ELAC2Q9BQ52 826 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CDADC1Q9BWV3 514 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 OSBPL11Q9BXB4 747 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 AKTIPQ9H8T0 292 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 MTHFD2LQ9H903 347 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 COQ3Q9NZJ6 369 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 KLRF1Q9NZS2 232 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PPP4R1LQ9P1A2 415 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 LRFN1Q9P244 771 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 MYOTQ9UBF9 498 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NKX1-2Q9UD57 310 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 MARCOQ9UEW3 520 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 DMRT1Q9Y5R6 373 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NPFFR2Q9Y5X5 522 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 GON4LQ3T8J9 2241 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 A0A0G2JND7 137 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 A0A1W2PR48 441 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 M0R3H8 397 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SDHDO14521 159 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SEC14L5O43304 696 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PTP4A3O75365 173 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CBR3O75828 277 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CIB2O75838 187 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NKX2-2O95096 273 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SYNGR4O95473 234 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NR2F1P10589 423 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 EPORP19235 508 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 HK1P19367 917 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ELK4P28324 431 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ADH6P28332 368 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PTPN6P29350 595 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SLC15A1P46059 708 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 DIO3P55073 304 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 WDR4P57081 412 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 HMGCS1Q01581 520 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NFYCQ13952 458 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TRMT5Q32P41 509 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 DEGS2Q6QHC5 323 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 Q6ZS92 163 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 LARP4Q71RC2 724 aaKnown RBP eCLIP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NET1Q7Z628 596 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 RANBP3LQ86VV4 465 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ANKRD46Q86W74 232 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 MCEMP1Q8IX19 187 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM151AQ8N4L1 468 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 DPP10Q8N608 796 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF781Q8N8C0 355 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PLPP7Q8NBV4 271 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 OR52N2Q8NGI0 321 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF671Q8TAW3 534 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 GPR151Q8TDV0 419 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 THAP3Q8WTV1 239 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 JADE3Q92613 823 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TAMM41Q96BW9 452 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 AMDHD1Q96NU7 426 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NSUN5Q96P11 429 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TRNT1Q96Q11 434 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ECSITQ9BQ95 431 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NAA11Q9BSU3 229 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TRIM2Q9C040 744 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NMUR2Q9GZQ4 415 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 WWTR1Q9GZV5 400 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CDCP1Q9H5V8 836 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CLMPQ9H6B4 373 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 GP6Q9HCN6 339 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ADPRHL2Q9NX46 363 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZDHHC2Q9UIJ5 367 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 DKKL1Q9UK85 242 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 IKZF3Q9UKT9 509 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CBLCQ9ULV8 474 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ATG4BQ9Y4P1 393 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 HTTP42858 3142 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 EP300Q09472 2414 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 KNTC1P50748 2209 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 BDP1A6H8Y1 2624 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 LOC390937A0A1W2PQ73 354 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 MEX3AA1L020 520 aaKnown RBP3.3□□□□□ -1.88
PTPN22-211ENST00000538253 HMX3A6NHT5 357 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TTLL8A6PVC2 850 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 NUDT19A8MXV4 375 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 L7N2F9 121 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 TOR1AO14656 332 aa3.3□□□□□ -1.88
PTPN22-211ENST00000538253 CASC3O15234 703 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms