RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ZDHHC1Q8WTX9 485 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 TFGQ92734 400 aaPredicted RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 MYADMQ96S97 322 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 MAPKAP1Q9BPZ7 522 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 ZDHHC5Q9C0B5 715 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 FZD4Q9ULV1 537 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 RPL36Q9Y3U8 105 aaKnown RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 GON4LQ3T8J9 2241 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 PCDH7O60245 1069 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 UGDHO60701 494 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 TFP02787 698 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 HPXP02790 462 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 CD3GP09693 182 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 H2AFB2P0C5Z0 115 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 CBR1P16152 277 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 DRD3P35462 400 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 CRYBA2P53672 197 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 WNT3P56703 355 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 PLK5Q496M5 336 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 SPIN4Q56A73 249 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 PIP5KL1Q5T9C9 394 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 HAGHLQ6PII5 290 aaPredicted RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 PDZD9Q8IXQ8 264 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 HSD17B8Q92506 261 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 CNOT9Q92600 299 aaKnown RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 MRPS24Q96EL2 167 aaKnown RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 BABAM2Q9NXR7 383 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 THAP10Q9P2Z0 257 aaPredicted RBP13.07□□□□□ -0.32
LIG1-203ENST00000536218 PLXNA2O75051 1894 aa13.07□□□□□ -0.32
LIG1-203ENST00000536218 ALPK3Q96L96 1907 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 LRRK1Q38SD2 2015 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SDC3O75056 442 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
LIG1-203ENST00000536218 NR2F6P10588 404 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 PIPP12273 146 aaPredicted RBP13.06□□□□□ -0.32
LIG1-203ENST00000536218 PRPH2P23942 346 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 ATP5A1P25705 553 aaKnown RBP13.06□□□□□ -0.32
LIG1-203ENST00000536218 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 ZP1P60852 638 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SRSF11Q05519 484 aaKnown RBP13.06□□□□□ -0.32
LIG1-203ENST00000536218 SLC27A4Q6P1M0 643 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 ZNF613Q6PF04 617 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SHFQ7M4L6 423 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 C11orf96Q7Z7L8 435 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SMAD5Q99717 465 aaKnown RBP13.06□□□□□ -0.32
LIG1-203ENST00000536218 SARGQ9BW04 601 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 TPT1P8Q9HAU6 139 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 TVP23BQ9NYZ1 205 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 NUBP2Q9Y5Y2 271 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 CD8B2A6NJW9 211 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 ZAR1LA6NP61 321 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 D6RAR5 112 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 TLX2O43763 284 aaPredicted RBP13.06□□□□□ -0.32
LIG1-203ENST00000536218 GADD45GO95257 159 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SULT1A3P0DMM9 295 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SULT1A4P0DMN0 295 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 C1GALT1C1LP0DN25 315 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 CD8BP10966 210 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
LIG1-203ENST00000536218 BTCP35070 178 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 RAB11FIP2Q7L804 512 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 LAS2Q8IYD9 372 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 GPR135Q8IZ08 494 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 IQCF1Q8N6M8 205 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 OR2L2Q8NH16 312 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 DMRTA2Q96SC8 542 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 DNTTIP1Q9H147 329 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 NDRG3Q9UGV2 375 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 ZFR2Q9UPR6 939 aaKnown RBP13.06□□□□□ -0.32
LIG1-203ENST00000536218 SLC6A5Q9Y345 797 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 SLC22A7Q9Y694 548 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 BRWD1Q9NSI6 2320 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 C2orf16Q68DN1 1984 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 CPEP16870 476 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 TAS2R38P59533 333 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 DPTQ07507 201 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 CST6Q15828 149 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 TMEM52BQ4KMG9 183 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 C10orf90Q96M02 699 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 ZNF285Q96NJ3 590 aa13.06□□□□□ -0.32
LIG1-203ENST00000536218 TRABD2BA6NFA1 517 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 SCN2BO60939 215 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 KLK1P06870 262 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 PSMB5P28074 263 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 FNTBP49356 437 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 CDK3Q00526 305 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
LIG1-203ENST00000536218 ZNF658BQ4V348 819 aaPredicted RBP13.05□□□□□ -0.32
LIG1-203ENST00000536218 IFI44LQ53G44 452 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 FAM46CQ5VWP2 391 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 SAMD12Q8N8I0 201 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 OR52N1Q8NH53 320 aa13.05□□□□□ -0.32
LIG1-203ENST00000536218 SFT2D1Q8WV19 159 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms