RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GPR50Q13585 617 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 ZNF417Q8TAU3 575 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 RLN3Q8WXF3 142 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 TMEM246Q9BRR3 403 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 DPCDQ9BVM2 203 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 TIMP2P16035 220 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 CD53P19397 219 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 SGPP2Q8IWX5 399 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 MYADMQ96S97 322 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 MACROD1Q9BQ69 325 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 CCDC32Q9BV29 185 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 OR6C2Q9NZP2 312 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 IFT172Q9UG01 1749 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 ZFAND5O76080 213 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 CD46P15529 392 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 VASPP50552 380 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 C6orf183Q5T699 404 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 RTP4Q96DX8 246 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 ZNF681Q96N22 645 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 CLSTN3Q9BQT9 956 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 LMF2Q9BU23 707 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 YARS2Q9Y2Z4 477 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 PENKP01210 267 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 INTS14Q96SY0 518 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 SLC6A5Q9Y345 797 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 LTN1O94822 1766 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 LILRB5O75023 590 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 HMGN2P05204 90 aaKnown RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 WNT4P56705 351 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 WDSUB1Q8N9V3 476 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 RAB39BQ96DA2 213 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 ADOQ96SZ5 270 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 VRK1Q99986 396 aaPredicted RBP17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 FUNDC2Q9BWH2 189 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 CUTCQ9NTM9 273 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 RLIMQ9NVW2 624 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 CBLCQ9ULV8 474 aa17.1■□□□□ 0.33
SFSWAP-203ENST00000535236 NME4O00746 187 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 FRS3O43559 492 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 RETP07949 1114 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 CTBSQ01459 385 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 TLDC1Q6P9B6 456 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 KDELC1Q6UW63 502 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 TRUB1Q8WWH5 349 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 SENP5Q96HI0 755 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 FAIMQ9NVQ4 179 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 BOKQ9UMX3 212 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 CSNK1G3Q9Y6M4 447 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 ZNF789Q5FWF6 425 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 RAB41Q5JT25 222 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 MPP7Q5T2T1 576 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 EID2Q8N6I1 236 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 MRPL43Q8N983 215 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 CHDHQ8NE62 594 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 TIMM29Q9BSF4 260 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 VSX1Q9NZR4 365 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 DRGXA6NNA5 263 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 ERVK-25P63136 954 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 OPN5Q6U736 354 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 SLC46A2Q9BY10 475 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 MROH6A6NGR9 719 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 SNNO75324 88 aaPredicted RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 DBHP09172 617 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 IL32P24001 234 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 SLC6A11P48066 632 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 GK3PQ14409 553 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 EXOSC7Q15024 291 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 GPR149Q86SP6 731 aa17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 ASCC1Q8N9N2 400 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 UNKLQ9H9P5 680 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-203ENST00000535236 MBLAC1A4D2B0 266 aaPredicted RBP17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 G3V2L1 256 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 HTRA3P83110 453 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 CHRNEQ04844 493 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 PKDCCQ504Y2 493 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 PLCXD3Q63HM9 321 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 C6orf89Q6UWU4 347 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 MFSD6LQ8IWD5 586 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 PAPD5Q8NDF8 572 aaKnown RBP17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 ZNF587Q96SQ5 575 aaPredicted RBP17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 OPN1LWP04000 364 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 ETV5P41161 510 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 NFATC4Q14934 902 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 FAM83FQ8NEG4 500 aaPredicted RBP17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 OR4K15Q8NH41 348 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 HLA-CQ95604 372 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 MSANTD3Q96H12 275 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 SLAMF7Q9NQ25 335 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 LRFN1Q9P244 771 aa17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 CNOT11Q9UKZ1 510 aaKnown RBP17.08■□□□□ 0.33
SFSWAP-203ENST00000535236 BMP4P12644 408 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 TAS2R31P59538 309 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 TRA2BP62995 288 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 CYCSP99999 105 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 CPZQ66K79 652 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 CCBE1Q6UXH8 406 aaPredicted RBP17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 OBP2BQ9NPH6 170 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms