RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 OR2B2Q9GZK3 357 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 OR8D2Q9GZM6 311 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 OR10A5Q9H207 317 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 DSN1Q9H410 356 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 ANKRA2Q9H9E1 313 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 P4HTMQ9NXG6 502 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.39□□□□□ -0.59
SCARB1-204ENST00000535005 OSGIN1Q9UJX0 560 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 CFL2Q9Y281 166 aa11.39□□□□□ -0.59
SCARB1-204ENST00000535005 NSG1A0A0A6YYJ2 146 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 EVPLLA8MZ36 301 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 PEX12O00623 359 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 SNX4O95219 450 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 CST1P01037 141 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 HMGN2P05204 90 aaKnown RBP11.38□□□□□ -0.59
SCARB1-204ENST00000535005 ICAM2P13598 275 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 CHI3L1P36222 383 aaPredicted RBP11.38□□□□□ -0.59
SCARB1-204ENST00000535005 MAP3K8P41279 467 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 EMDP50402 254 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF45Q02386 682 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 EMX1Q04741 257 aaPredicted RBP11.38□□□□□ -0.59
SCARB1-204ENST00000535005 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 TP53BP2Q13625 1128 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 EXOSC7Q15024 291 aaKnown RBP11.38□□□□□ -0.59
SCARB1-204ENST00000535005 MEP1AQ16819 746 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
SCARB1-204ENST00000535005 SIMC1Q8NDZ2 872 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 OR8K3Q8NH51 312 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 OR5AK3PQ8NH89 298 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF486Q96H40 463 aaPredicted RBP11.38□□□□□ -0.59
SCARB1-204ENST00000535005 SLIRPQ9GZT3 109 aaKnown RBP11.38□□□□□ -0.59
SCARB1-204ENST00000535005 IKZF5Q9H5V7 419 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 COPS7AQ9UBW8 275 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 PRODH2Q9UF12 536 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 CORO2BQ9UQ03 480 aa11.38□□□□□ -0.59
SCARB1-204ENST00000535005 BCKDKO14874 412 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SNPHO15079 494 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 GSTA4O15217 222 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 KLK10O43240 276 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SOX30O94993 753 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ANGPTL1O95841 491 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 C1QCP02747 245 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 WT1P19544 449 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 MAN2A2P49641 1150 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 PRIM2P49643 509 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 PRKAG1P54619 331 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 RGNQ15493 299 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 LAIR2Q6ISS4 152 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 MFSD12Q6NUT3 480 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF321PQ8N8H1 164 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 CDRT4Q8N9R6 151 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 C16orf52Q8NHV5 167 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ELP5Q8TE02 316 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 THAP4Q8WY91 577 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 NCLNQ969V3 563 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SLC47A1Q96FL8 570 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 VSTM2LQ96N03 204 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SNX18Q96RF0 628 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 CCNL2Q96S94 520 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 LMF2Q9BU23 707 aaKnown RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 BTBD2Q9BX70 525 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ACTRT3Q9BYD9 372 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 MMP25Q9NPA2 562 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF223Q9UK11 482 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 FBXL4Q9UKA2 621 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 FREM2Q5SZK8 3169 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ACACAQ13085 2346 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 MED19A0JLT2 244 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF891A8MT65 544 aaPredicted RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 GNGT2O14610 69 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ANXA11P50995 505 aaKnown RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 DEFA1P59665 94 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 DEFA3P59666 94 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SLC35A2P78381 396 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 PRKCDQ05655 676 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 CDC73Q6P1J9 531 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 LYSMD2Q8IV50 215 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 OR2T12Q8NG77 320 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 LILRB4Q8NHJ6 448 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 NDNFQ8TB73 568 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 RASSF5Q8WWW0 418 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 C16orf58Q96GQ5 468 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SLC35G5Q96KT7 338 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 APOL4Q9BPW4 351 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 THUMPD3Q9BV44 507 aaKnown RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SERHL2Q9H4I8 314 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 FOLH1BQ9HBA9 442 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 ZNF160Q9HCG1 818 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 SACM1LQ9NTJ5 587 aa11.37□□□□□ -0.59
SCARB1-204ENST00000535005 CCDC59Q9P031 241 aaKnown RBP11.37□□□□□ -0.59
SCARB1-204ENST00000535005 CDC14CA4D256 554 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 DUXAA6NLW8 204 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 EFSO43281 561 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 ZFAND5O76080 213 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 NKX2-2O95096 273 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 DCTP40126 519 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 PPICP45877 212 aa11.36□□□□□ -0.59
SCARB1-204ENST00000535005 MTPNP58546 118 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms