RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 HS3ST3B1Q9Y662 390 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 KCNE3Q9Y6H6 103 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CELSR3Q9NYQ7 3312 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 TAF4O00268 1085 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 SCDO00767 359 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 EFSO43281 561 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 FCMRO60667 390 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 RASAL1O95294 804 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 IL33O95760 270 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 HPRP00739 348 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 FPR1P21462 350 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 CLK3P49761 638 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 RGS8P57771 180 aaPredicted RBP10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC26A5P58743 744 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 VLDLRP98155 873 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 PLCXD2Q0VAA5 305 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 SRSF6Q13247 344 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 IL10RAQ13651 578 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 RFX4Q33E94 735 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 COLEC12Q5KU26 742 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 CCNJQ5T5M9 372 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 LPCAT4Q643R3 524 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 SHQ1Q6PI26 577 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 KIRREL2Q6UWL6 708 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 PPP1R32Q7Z5V6 425 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 CARM1Q86X55 608 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 LINC00471Q8N535 108 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 BCORP1Q8N888 145 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 TOR1AIP2Q8NFQ8 470 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 OR10Q1Q8NGQ4 319 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 ADAMTS17Q8TE56 1095 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 DOK4Q8TEW6 326 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 NRG4Q8WWG1 115 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 TMBIM1Q969X1 311 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 C7orf34Q96L11 122 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 NUDT9Q9BW91 350 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF700Q9H0M5 742 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 P4HTMQ9NXG6 502 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 NDUFAF4Q9P032 175 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 KIF17Q9P2E2 1029 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 ENOPH1Q9UHY7 261 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 TMCC3Q9ULS5 477 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC35A3Q9Y2D2 325 aa10.08□□□□□ -0.8
CCDC90B-218ENST00000533761 ANKRD11Q6UB99 2663 aaPredicted RBP10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 NSG1A0A0A6YYJ2 146 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 A0A1W2PQ72 361 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 SAC3D1A6NKF1 404 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 SOCS6O14544 535 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 NKX2-8O15522 239 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 LILRA1O75019 489 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 SEC24DO94855 1032 aaPredicted RBP10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 CLPSP04118 112 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ACADSP16219 412 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 NAGAP17050 411 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 RPS4Y1P22090 263 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 RRM2P31350 389 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 DCTP40126 519 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 OR1E2P47887 323 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ALDH3A2P51648 485 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 EFNA3P52797 238 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ATP12AP54707 1039 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 TMPRSS3P57727 454 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 RNF4P78317 190 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 SPIBQ01892 262 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 EFR3AQ14156 821 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 PLAG1Q6DJT9 500 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 HMBOX1Q6NT76 420 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 PPP4R4Q6NUP7 873 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 NPSR1Q6W5P4 371 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 DEF8Q6ZN54 512 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 NDUFAF7Q7L592 441 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 MRGPREQ86SM8 312 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 STK32CQ86UX6 486 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 EGFL6Q8IUX8 553 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 C9orf40Q8IXQ3 194 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF440Q8IYI8 595 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 DND1Q8IYX4 353 aaKnown RBP10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC34A3Q8N130 599 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF614Q8N883 585 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 OR11G2Q8NGC1 345 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 M1APQ8TC57 530 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 FAM110BQ8TC76 370 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC22A8Q8TCC7 542 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 DIO2Q92813 273 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ADIPOR1Q96A54 375 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 C8orf44Q96CB5 159 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 FER1L6-AS2Q96M78 137 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 FNDC11Q9BVV2 318 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF556Q9HAH1 456 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 KRCC1Q9NPI7 259 aaPredicted RBP10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 ABCG2Q9UNQ0 655 aa10.07□□□□□ -0.8
CCDC90B-218ENST00000533761 IGHV1-45A0A0A0MS14 117 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 TRBV11-1A0A0K0K1C0 115 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 GXYLT2A0PJZ3 443 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 CDHR4A6H8M9 788 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 TNFRSF11BO00300 401 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 FMO6PO60774 539 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 GADD45GO95257 159 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 PRKAR1AP10644 381 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms