RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ZNF708P17019 499 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 POU3F2P20265 443 aaPredicted RBP14.34□□□□□ -0.11
TSKU-204ENST00000533752 TIMP3P35625 211 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 LHX2P50458 406 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 EEFSECP57772 596 aaKnown RBP14.34□□□□□ -0.11
TSKU-204ENST00000533752 B3GALT5-AS1P59052 145 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 SQLEQ14534 574 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 KLHL26Q53HC5 615 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 RNF130Q86XS8 419 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 MEIOBQ8N635 442 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 OR9I1Q8NGQ6 314 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 LILRB4Q8NHJ6 448 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 B4GALNT2Q8NHY0 566 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 PHOSPHO1Q8TCT1 267 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 XAGE5Q8WWM1 108 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 ZBTB8AQ96BR9 441 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 RUBCNLQ9H714 662 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 TRIM33Q9UPN9 1127 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 DTNAQ9Y4J8 743 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 CACNA1CQ13936 2221 aa14.34□□□□□ -0.11
TSKU-204ENST00000533752 CENPEQ02224 2701 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 ATP8B1O43520 1251 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 KIAA0513O60268 411 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 IL2RAP01589 272 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 TCEA1P23193 301 aaKnown RBP14.33□□□□□ -0.12
TSKU-204ENST00000533752 CDKN2CP42773 168 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 CLDN18P56856 261 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 CD226Q15762 336 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 ZNF141Q15928 474 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 SLC25A35Q3KQZ1 300 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 C6orf10Q5SRN2 563 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 DNAJC14Q6Y2X3 702 aaPredicted RBP14.33□□□□□ -0.12
TSKU-204ENST00000533752 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 ROPN1LQ96C74 230 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 SH3YL1Q96HL8 342 aaPredicted RBP14.33□□□□□ -0.12
TSKU-204ENST00000533752 ZFP3Q96NJ6 502 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 UCN2Q96RP3 112 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 TRIB1Q96RU8 372 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 KCNJ16Q9NPI9 418 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 WDR45Q9Y484 360 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 AP4B1Q9Y6B7 739 aa14.33□□□□□ -0.12
TSKU-204ENST00000533752 NPIPA5A0A0B4J1W7 369 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 A0A0G2JNJ9 132 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 OR2M5A3KFT3 312 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 MBD3L4A6NDZ8 208 aaPredicted RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 MBD3L3A6NE82 208 aaPredicted RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 MBD3L5A6NJ08 208 aaPredicted RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 FAM90A27PA6NNH2 459 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 NPIPA7E9PJI5 369 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 GTPBP1O00178 669 aaKnown RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 HMGN4O00479 90 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 HNRNPRO43390 633 aaKnown RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 GMFGO60234 142 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 GSNP06396 782 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 NPIPA8P0DM63 369 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 UBL4AP11441 157 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 COL8A1P27658 744 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 ADH7P40394 386 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 EIF1P41567 113 aaKnown RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 ZNF117Q03924 483 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 SRYQ05066 204 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 GPR68Q15743 365 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 TMEM44Q2T9K0 475 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.32□□□□□ -0.12
TSKU-204ENST00000533752 PDZK1Q5T2W1 519 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 ARSKQ6UWY0 536 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 CHMP1BQ7LBR1 199 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 CCDC71Q8IV32 467 aaPredicted RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 ZNF619Q8N2I2 560 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 GTPBP8Q8N3Z3 284 aaPredicted RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 TOR1AIP2Q8NFQ8 470 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 MBD3L2Q8NHZ7 208 aaPredicted RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 ZFP90Q8TF47 636 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 RAB8BQ92930 207 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 VPS33AQ96AX1 596 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 TRNT1Q96Q11 434 aaKnown RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 TM9SF2Q99805 663 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 TUBA1CQ9BQE3 449 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 RAD21L1Q9H4I0 556 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 NPHS2Q9NP85 383 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 MRGBPQ9NV56 204 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 MED17Q9NVC6 651 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 THUMPD1Q9NXG2 353 aaKnown RBP14.32□□□□□ -0.12
TSKU-204ENST00000533752 Q9UFV3 132 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 VDAC3Q9Y277 283 aa14.32□□□□□ -0.12
TSKU-204ENST00000533752 MAST4O15021 2626 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 SERINC4A6NH21 518 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 CLCA1A8K7I4 914 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 NR5A2O00482 541 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 DVL2O14641 736 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 ZNF264O43296 627 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 EIF4E2O60573 245 aaKnown RBP14.31□□□□□ -0.12
TSKU-204ENST00000533752 TNFRSF21O75509 655 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 NUDT14O95848 222 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 TROVE2P10155 538 aaKnown RBP eCLIP14.31□□□□□ -0.12
TSKU-204ENST00000533752 ME2P23368 584 aa14.31□□□□□ -0.12
TSKU-204ENST00000533752 CEACAM8P31997 349 aaPredicted RBP14.31□□□□□ -0.12
TSKU-204ENST00000533752 STARP49675 285 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms