RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 GLRA4Q5JXX5 417 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 LRRC38Q5VT99 294 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 IGFL4Q6B9Z1 124 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 FAM71E1Q6IPT2 247 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ANKRD54Q6NXT1 300 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 DENND1BQ6P3S1 775 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 HAGHLQ6PII5 290 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 TIPARPQ7Z3E1 657 aaKnown RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 P2RY8Q86VZ1 359 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 AQP12AQ8IXF9 295 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 DDIASQ8IXT1 998 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 PRSS58Q8IYP2 241 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 DHRSXQ8N5I4 330 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 PARP16Q8N5Y8 322 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 DNAJC5GQ8N7S2 189 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CLEC18CQ8NCF0 446 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 NLGN4YQ8NFZ3 816 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 OR2L2Q8NH16 312 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 TERB2Q8NHR7 220 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SCARB1Q8WTV0 552 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 RGP1Q92546 391 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 HAS2Q92819 552 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 MRGPRFQ96AM1 343 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CMTM7Q96FZ5 175 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 MRGPRX1Q96LB2 322 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SAMD8Q96LT4 415 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ERMAPQ96PL5 475 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 RBP7Q96R05 134 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SLC22A12Q96S37 553 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 P2RX7Q99572 595 aaKnown RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 MARVELD1Q9BSK0 173 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 BEX2Q9BXY8 128 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 LRRC2Q9BYS8 371 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 LHPPQ9H008 270 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 PCBD2Q9H0N5 130 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SLC25A32Q9H2D1 315 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 PPP1R3EQ9H7J1 279 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 COQ10BQ9H8M1 238 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 MKKSQ9NPJ1 570 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 MIEF1Q9NQG6 463 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 PDGFCQ9NRA1 345 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 CENPMQ9NSP4 180 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 LRFN1Q9P244 771 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SLCO3A1Q9UIG8 710 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 TBC1D24Q9ULP9 559 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 NENFQ9UMX5 172 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 EXOGQ9Y2C4 368 aaKnown RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 SLC27A6Q9Y2P4 619 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CLCA3PQ9Y6N3 262 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ADAMTS13Q76LX8 1427 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CROCCQ5TZA2 2017 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 USP54Q70EL1 1684 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FMN2Q9NZ56 1722 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 LAMA4Q16363 1823 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 A0A0U1RQF3 1178 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 A0A1B0GV72 72 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FAM230AA0A1W2PPH8 454 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 A8MWP6 167 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 B4DXG7 233 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 H3BQ06 376 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 M0R143 59 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GTPBP1O00178 669 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 AP4M1O00189 453 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 DFFAO00273 331 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 PDCD5O14737 125 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SLC16A4O15374 487 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GRID2O43424 1007 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SNNO75324 88 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 ECI2O75521 394 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 RECQL5O94762 991 aaPredicted RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 ATG12O94817 140 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 CTDNEP1O95476 244 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 AP2A1O95782 977 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SERPINA1P01009 418 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 MMP1P03956 469 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 CLEC3BP05452 202 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 C8GP07360 202 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 FTH1P19P0C7X4 201 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 STAG3L2P0CL84 134 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GABRA1P14867 456 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SPNP16150 400 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 NPR2P20594 1047 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 HNRNPA2B1P22626 353 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 CRHBPP24387 322 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 NDUFS1P28331 727 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GTF2E2P29084 291 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 PTPN6P29350 595 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GNRHRP30968 328 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 THPOP40225 353 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 GLUD2P49448 558 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 RARRES1P49788 294 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 MTHFSP49914 203 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 RORCP51449 518 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 ERVS71-1P61550 626 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 TWF1Q12792 350 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 ELAVL2Q12926 359 aaKnown RBP5.12□□□□□ -1.59
CD44-236ENST00000533222 MTAPQ13126 283 aa5.12□□□□□ -1.59
CD44-236ENST00000533222 SRSF5Q13243 272 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms