RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 H3BNH8 94 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 RNASET2O00584 256 aaKnown RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 CRHP06850 196 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 MATN1P21941 496 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 CPA2P48052 419 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 ZNF41P51814 821 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 TPD52P55327 224 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 CLDN15P56746 228 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 WDR4P57081 412 aaKnown RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 MAGOHP61326 146 aaKnown RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 SGCBQ16585 318 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 FLYWCH1Q4VC44 716 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 BEND6Q5SZJ8 279 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 DCST2Q5T1A1 773 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 ANXA8L1Q5VT79 327 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 ATG16L1Q676U5 607 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 C6orf120Q7Z4R8 191 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 MTERF4Q7Z6M4 381 aaKnown RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 LUZP2Q86TE4 346 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 CDH24Q86UP0 819 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 CLECL1Q8IZS7 167 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 B4GALNT2Q8NHY0 566 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 PHOSPHO1Q8TCT1 267 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 FAM222BQ8WU58 562 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 OR7D2Q96RA2 312 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 RBM24Q9BX46 236 aaKnown RBP15.54■□□□□ 0.08
PHRF1-204ENST00000532550 PINK1Q9BXM7 581 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 MEAF6Q9HAF1 191 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 KCNE3Q9Y6H6 103 aa15.54■□□□□ 0.08
PHRF1-204ENST00000532550 PRSS51A0A1B0GVH4 220 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 SHISA8B8ZZ34 492 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 GTPBP1O00178 669 aaKnown RBP15.53■□□□□ 0.08
PHRF1-204ENST00000532550 CPSF4O95639 269 aaKnown RBP15.53■□□□□ 0.08
PHRF1-204ENST00000532550 CLNS1AP54105 237 aaKnown RBP15.53■□□□□ 0.08
PHRF1-204ENST00000532550 SLC18A1P54219 525 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 CLDN20P56880 219 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 TMEM44Q2T9K0 475 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 OR4A15Q8NGL6 344 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 FIG4Q92562 907 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 ZBTB8AQ96BR9 441 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 TMBIM4Q9HC24 238 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 DNAJB12Q9NXW2 375 aaKnown RBP15.53■□□□□ 0.08
PHRF1-204ENST00000532550 PACSIN3Q9UKS6 424 aa15.53■□□□□ 0.08
PHRF1-204ENST00000532550 A0A1W2PNV4 684 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 TRPC5OSA6NMA1 111 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 EIF1AYO14602 144 aaKnown RBP15.52■□□□□ 0.08
PHRF1-204ENST00000532550 CTAG2O75638 210 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 ZNF17P17021 662 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 ATP12AP54707 1039 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 SORDQ00796 357 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 OCRLQ01968 901 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 DPY19L1Q2PZI1 675 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 KLHL26Q53HC5 615 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 WDR75Q8IWA0 830 aaKnown RBP15.52■□□□□ 0.08
PHRF1-204ENST00000532550 CLEC4FQ8N1N0 589 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 GTPBP8Q8N3Z3 284 aaPredicted RBP15.52■□□□□ 0.08
PHRF1-204ENST00000532550 CNEP1R1Q8N9A8 125 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 OR5D16Q8NGK9 328 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 TESCQ96BS2 214 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 POLDIP3Q9BY77 421 aaKnown RBP15.52■□□□□ 0.08
PHRF1-204ENST00000532550 PRRG4Q9BZD6 226 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 MANSC1Q9H8J5 431 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 MED17Q9NVC6 651 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 ZNF175Q9Y473 711 aa15.52■□□□□ 0.08
PHRF1-204ENST00000532550 AKAP6Q13023 2319 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 NPIPA5A0A0B4J1W7 369 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 RNF103-CHMP3A0A140T963 221 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 A8MXE2 369 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 NPIPA7E9PJI5 369 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 SLCO1B7G3V0H7 640 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 ANKRD28O15084 1053 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 HDAC3O15379 428 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 TNFSF13O75888 250 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 NUDT14O95848 222 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 NPIPA8P0DM63 369 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 KITP10721 976 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 EPXP11678 715 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 UQCRC2P22695 453 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 S100A3P33764 101 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 EIF1AXP47813 144 aaKnown RBP15.51■□□□□ 0.07
PHRF1-204ENST00000532550 RPS26P62854 115 aaKnown RBP15.51■□□□□ 0.07
PHRF1-204ENST00000532550 RAC1P63000 192 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 PON3Q15166 354 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 CD226Q15762 336 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 OGFOD2Q6N063 350 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 PPP4R4Q6NUP7 873 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 SPATA19Q7Z5L4 167 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 ANKRD46Q86W74 232 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 METTL25Q8N6Q8 603 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 ZNF614Q8N883 585 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 LINC01560Q8TB33 94 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 FNDC9Q8TBE3 224 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 RAB3IL1Q8TBN0 382 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 ZNF845Q96IR2 970 aaPredicted RBP15.51■□□□□ 0.07
PHRF1-204ENST00000532550 SLC35G5Q96KT7 338 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 SDF2Q99470 211 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 EXD2Q9NVH0 621 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 DTNAQ9Y4J8 743 aa15.51■□□□□ 0.07
PHRF1-204ENST00000532550 C7orf72A4D263 438 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms