RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 IFNA7P01567 189 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 DAP3P51398 398 aaKnown RBP10.6□□□□□ -0.71
PTPRK-221ENST00000532331 MECP2P51608 486 aaKnown RBP10.6□□□□□ -0.71
PTPRK-221ENST00000532331 TNFRSF17Q02223 184 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 WDR20Q8TBZ3 569 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 CDS1Q92903 461 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 ISOC1Q96CN7 298 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 METTL2AQ96IZ6 378 aaKnown RBP10.6□□□□□ -0.71
PTPRK-221ENST00000532331 NEDD4LQ96PU5 975 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 MGLLQ99685 303 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 ZPBPQ9BS86 351 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 ATG5Q9H1Y0 275 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 WSB2Q9NYS7 404 aaPredicted RBP10.6□□□□□ -0.71
PTPRK-221ENST00000532331 K7ESM1 405 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 DDAH2O95865 285 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 PKLRP30613 574 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 CTXN1P60606 82 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 CD83Q01151 205 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF829Q3KNS6 432 aaPredicted RBP10.6□□□□□ -0.71
PTPRK-221ENST00000532331 CHRFAM7AQ494W8 412 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 NKAIN1Q4KMZ8 207 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 METRNLQ641Q3 311 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 SSX6Q7RTT6 188 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 NRMQ8IXM6 262 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 GALNT6Q8NCL4 622 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 OR13C3Q8NGS6 347 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 GATAD2BQ8WXI9 593 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 RFT1Q96AA3 541 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 BTBD2Q9BX70 525 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 ADAM29Q9UKF5 820 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 ALG5Q9Y673 324 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 NME4O00746 187 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 YES1P07947 543 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 IDUAP35475 653 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 ADH7P40394 386 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 AKR1D1P51857 326 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 DNASE1L3Q13609 305 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 PRAMEF20Q5VT98 475 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 LEG1Q6P5S2 330 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 KCTD9Q7L273 389 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 KLBQ86Z14 1044 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 METTL25Q8N6Q8 603 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 LMNTD1Q8N9Z9 388 aa10.6□□□□□ -0.71
PTPRK-221ENST00000532331 B4GALT3O60512 393 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 RBBP9O75884 186 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 RGS9O75916 674 aaPredicted RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 HMGN2P05204 90 aaKnown RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 STSP08842 583 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF35P13682 527 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 CAPN3P20807 821 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 IMPA1P29218 277 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 SLC18B1Q6NT16 456 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 CNTN4Q8IWV2 1026 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 MARVELD2Q8N4S9 558 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 SFXN5Q8TD22 340 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 NETO1Q8TDF5 533 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 HOXB13Q92826 284 aaPredicted RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 AIFM2Q9BRQ8 373 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 PRDM9Q9NQV7 894 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 INTS6Q9UL03 887 aaKnown RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 PCDHB10Q9UN67 800 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 POLHQ9Y253 713 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 A0A1B0GVC2 190 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 SH3D21A4FU49 640 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 TRIM64A6NGJ6 449 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 RETP07949 1114 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 CD3GP09693 182 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 UGT2B10P36537 528 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 GABARAPL2P60520 117 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 ZXDBP98169 803 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 SLC5A12Q1EHB4 618 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 OR5M10Q6IEU7 315 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 BAIAP2L2Q6UXY1 529 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF534Q76KX8 674 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 TMPRSS12Q86WS5 348 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF584Q8IVC4 421 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 DNAAF1Q8NEP3 725 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 LIN28AQ9H9Z2 209 aaKnown RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 CNOT11Q9UKZ1 510 aaKnown RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 ECM29Q5VYK3 1845 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 EEF1E1-BLOC1S5C9J1V9 151 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 C5orf67F2Z3F1 127 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 EEF1E1O43324 174 aaKnown RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 HRGP04196 525 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 DHRS4L1P0CG22 281 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 GRPRP30550 384 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 ACVR1BP36896 505 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 PSMA6P60900 246 aaKnown RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 GABREP78334 506 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 TAP2Q03519 686 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 OR4K13Q8NH42 304 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 FN3KQ9H479 309 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 NUFIP1Q9UHK0 495 aaKnown RBP10.59□□□□□ -0.71
PTPRK-221ENST00000532331 A6NIZ1 184 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 FANCGO15287 622 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 KLK10O43240 276 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 ITGB8P26012 769 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 RBMXP38159 391 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms