RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 AP1ARQ63HQ0 302 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 FAHD1Q6P587 224 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 UGT2A3Q6UWM9 527 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 TSPYL5Q86VY4 417 aaPredicted RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 MORN4Q8NDC4 146 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 DHRS1Q96LJ7 313 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 PRRC1Q96M27 445 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 IP6K3Q96PC2 410 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 GAL3ST4Q96RP7 486 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 G6PC3Q9BUM1 346 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 CTPS2Q9NRF8 586 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 P4HTMQ9NXG6 502 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 RAXQ9Y2V3 346 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 CEP295Q9C0D2 2601 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 TRBV4-1A0A0J9YWV2 114 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 CDC14CA4D256 554 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 H0YAE9 185 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 NKX2-8O15522 239 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 MITFO75030 526 aaPredicted RBP13.27□□□□□ -0.29
TTC39A-216ENST00000530004 CCNB2O95067 398 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 CLIC3O95833 236 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 ATP1A4Q13733 1029 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 EBPQ15125 230 aaKnown RBP13.27□□□□□ -0.29
TTC39A-216ENST00000530004 RFX4Q33E94 735 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 ATP1A1-AS1Q5TC04 95 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 RNF220Q5VTB9 566 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 NDUFAF7Q7L592 441 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 C9orf40Q8IXQ3 194 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 SLC5A8Q8N695 610 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 ZNF614Q8N883 585 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 PIK3C3Q8NEB9 887 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 NFAM1Q8NET5 270 aaPredicted RBP13.27□□□□□ -0.29
TTC39A-216ENST00000530004 OR9Q2Q8NGE9 314 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 ADIPOR1Q96A54 375 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 LCORQ96JN0 433 aaPredicted RBP13.27□□□□□ -0.29
TTC39A-216ENST00000530004 FEVQ99581 238 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 PRR14Q9BWN1 585 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 NXF5Q9H1B4 397 aaKnown RBP13.27□□□□□ -0.29
TTC39A-216ENST00000530004 KRT84Q9NSB2 600 aa13.27□□□□□ -0.29
TTC39A-216ENST00000530004 NSG1A0A0A6YYJ2 146 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 FRG2CA6NGY1 282 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 ZNF891A8MT65 544 aaPredicted RBP13.26□□□□□ -0.29
TTC39A-216ENST00000530004 TAF4O00268 1085 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 AP3D1O14617 1153 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 TPST2O60704 377 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 LYNP07948 512 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 MYF6P23409 242 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 ELAVL4P26378 380 aaKnown RBP13.26□□□□□ -0.29
TTC39A-216ENST00000530004 GPR143P51810 404 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 SMIM11AP58511 58 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 TAS2R41P59536 307 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 HOXC5Q00444 222 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 KCNAB2Q13303 367 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 DCST1Q5T197 706 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 PDZK1Q5T2W1 519 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 SLC29A4Q7RTT9 530 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 AMER2Q8N7J2 671 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 ZNF555Q8NEP9 628 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 B3GNT7Q8NFL0 401 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 IMMP1LQ96LU5 166 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 LMF1Q96S06 567 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 FNDC11Q9BVV2 318 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 FAM118AQ9NWS6 357 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 FBXL4Q9UKA2 621 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 PPIEQ9UNP9 301 aaKnown RBP13.26□□□□□ -0.29
TTC39A-216ENST00000530004 PCDHGA10Q9Y5H3 936 aa13.26□□□□□ -0.29
TTC39A-216ENST00000530004 CDHR4A6H8M9 788 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 MAGEA13PA6NCF6 341 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 OR6C76A6NM76 312 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 HPP00738 406 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 PRKAR1AP10644 381 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 DRD5P21918 477 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 CHN2P52757 468 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 SLC26A5P58743 744 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 DCAF7P61962 342 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 TLE3Q04726 772 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 DECR1Q16698 335 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.25□□□□□ -0.29
TTC39A-216ENST00000530004 TTC23Q5W5X9 447 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 HLA-DQA1Q5Y7H0 255 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 ISLR2Q6UXK2 745 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 OFCC1Q8IZS5 231 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 APCDD1LQ8NCL9 501 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 THAP4Q8WY91 577 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 ZCCHC14Q8WYQ9 949 aaKnown RBP13.25□□□□□ -0.29
TTC39A-216ENST00000530004 EFHD2Q96C19 240 aaPredicted RBP13.25□□□□□ -0.29
TTC39A-216ENST00000530004 MCHR1Q99705 422 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 WWTR1Q9GZV5 400 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 RIBC2Q9H4K1 309 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 ARMC7Q9H6L4 198 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 A0A1W2PRQ8 180 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 TMEM8BA6NDV4 472 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 ARRDC5A6NEK1 342 aa13.25□□□□□ -0.29
TTC39A-216ENST00000530004 CPSF4LA6NMK7 179 aaKnown RBP13.25□□□□□ -0.29
TTC39A-216ENST00000530004 NPIPB9F8W1W9 429 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms