RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SLC44A2Q8IWA5 706 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 LIX1Q8N485 282 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 SGMS2Q8NHU3 365 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 RND1Q92730 232 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 HOXB13Q92826 284 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 TLCD1Q96CP7 247 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 MTERF3Q96E29 417 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 GIMAP5Q96F15 307 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 RSRC1Q96IZ7 334 aaKnown RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 ATP6V1G3Q96LB4 118 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 ZNF597Q96LX8 424 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 COL21A1Q96P44 957 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 GNRHR2Q96P88 292 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 ADOQ96SZ5 270 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 LMF2Q9BU23 707 aaKnown RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 C1orf50Q9BV19 199 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 SLC6A15Q9H2J7 730 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 TP63Q9H3D4 680 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 LDAHQ9H6V9 325 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 TMBIM4Q9HC24 238 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 KCNK9Q9NPC2 374 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 PNPLA3Q9NST1 481 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 TAS2R9Q9NYW1 312 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 SH3BP4Q9P0V3 963 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 NTMQ9P121 344 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 STOML1Q9UBI4 398 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 ATP6V1HQ9UI12 483 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 HAO1Q9UJM8 370 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 RAP2CQ9Y3L5 183 aa7.68□□□□□ -1.18
SSBP3-212ENST00000528930 YLPM1P49750 1951 aaKnown RBP7.68□□□□□ -1.18
SSBP3-212ENST00000528930 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 TMEM120BA0PK00 339 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 B4DXG7 233 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 BCKDKO14874 412 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 SCAMP2O15127 329 aaKnown RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 SMPD2O60906 423 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 COQ9O75208 318 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 CNOT4O95628 575 aaKnown RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 HSPA4LO95757 839 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 MYZAPP0CAP1 466 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 LAMP1P11279 417 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 PRPS2P11908 318 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 GRK2P25098 689 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 GDF1P27539 372 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 MAPK1P28482 360 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 PEX19P40855 299 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 TRPC1P48995 793 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 CDK9P50750 372 aaKnown RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 RPL14P50914 215 aaKnown RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 SLC18A1P54219 525 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 GAS1P54826 345 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 MANFP55145 182 aaKnown RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 PSPHP78330 225 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 EMX2Q04743 252 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 BST1Q10588 318 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 ZNF155Q12901 538 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 HSPB3Q12988 150 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 STX3Q13277 289 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 SNTA1Q13424 505 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 MLC1Q15049 377 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 ATP6AP1LQ52LC2 224 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 TTMPQ5BVD1 217 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 LCE1DQ5T752 114 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 TMEM211Q6ICI0 200 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 LARP4Q71RC2 724 aaKnown RBP eCLIP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 R3HCC1LQ7Z5L2 792 aaKnown RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 WDR53Q7Z5U6 358 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 CCDC71Q8IV32 467 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 RIMKLAQ8IXN7 391 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 KRTCAP2Q8N6L1 136 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 WDSUB1Q8N9V3 476 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 FNDC5Q8NAU1 212 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 OR7A2PQ8NGA2 310 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 OR5M9Q8NGP3 310 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 OR1J4Q8NGS1 313 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 PPP1R14CQ8TAE6 165 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 NEIL3Q8TAT5 605 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 FAM222BQ8WU58 562 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 SARAFQ96BY9 339 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 EFHD2Q96C19 240 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 PPCDCQ96CD2 204 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 COQ8BQ96D53 544 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 TMCO6Q96DC7 493 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 ZBED6CLQ96FA7 236 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 SH3GL3Q99963 347 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 OSBPL11Q9BXB4 747 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 METTL7AQ9H8H3 244 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 GALNT9Q9HCQ5 603 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 SIRT3Q9NTG7 399 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 ACSS1Q9NUB1 689 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 DDX18Q9NVP1 670 aaKnown RBP7.67□□□□□ -1.18
SSBP3-212ENST00000528930 PNPOQ9NVS9 261 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 ASIC5Q9NY37 505 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 B4GALT7Q9UBV7 327 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 C15orf41Q9Y2V0 281 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 PCDHGB3Q9Y5G1 929 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 FAM215AQ9Y5M1 114 aa7.67□□□□□ -1.18
SSBP3-212ENST00000528930 HEATR5AQ86XA9 2040 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms