RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 OR4C15Q8NGM1 316 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 TFAP2CQ92754 450 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 MRPL39Q9NYK5 338 aaKnown RBP14.06□□□□□ -0.16
USP47-207ENST00000527733 DUX4Q9UBX2 424 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 CDH10Q9Y6N8 788 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 UBE2QL1A1L167 161 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 ALOX12BO75342 701 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 ZNF43P17038 809 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 MAP2K4P45985 399 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 MAP4K2Q12851 820 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 FAM53BQ14153 422 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 IL20RBQ6UXL0 311 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 ZNF420Q8TAQ5 688 aaPredicted RBP14.06□□□□□ -0.16
USP47-207ENST00000527733 PMM1Q92871 262 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 TAMM41Q96BW9 452 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 C12orf43Q96C57 262 aaKnown RBP14.06□□□□□ -0.16
USP47-207ENST00000527733 TUBA1CQ9BQE3 449 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 A6NL46 340 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 PCDH17O14917 1159 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 PPP1R3DO95685 299 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 MADCAM1Q13477 382 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 LEG1Q6P5S2 330 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 DUSP22Q9NRW4 184 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 RXFP3Q9NSD7 469 aa14.06□□□□□ -0.16
USP47-207ENST00000527733 C19orf53Q9UNZ5 99 aaPredicted RBP14.06□□□□□ -0.16
USP47-207ENST00000527733 H0YIG0 161 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 IFNA6P05013 189 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 S1PR1P21453 382 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 PYCR1P32322 319 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 TRHRP34981 398 aaPredicted RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 PLP2Q04941 152 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 RNASE12Q5GAN4 147 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 PRAMEF8Q5VWM4 474 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 PRAMEF7Q5VXH5 474 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 CARD17Q5XLA6 110 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 NLGN4XQ8N0W4 816 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 MMP21Q8N119 569 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 ANKK1Q8NFD2 765 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 CNN2Q99439 309 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 TMEM185BQ9H7F4 350 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 GPN2Q9H9Y4 310 aaPredicted RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 ZNF225Q9UK10 706 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 RPH3AQ9Y2J0 694 aaPredicted RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 A0A1B0GVI7 797 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 SERINC4A6NH21 518 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 CLCA1A8K7I4 914 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 CDRT1O95170 752 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 CTBP2P56545 445 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 PDE7AQ13946 482 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 ZNF385BQ569K4 471 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 TMEM151AQ8N4L1 468 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 NXPE2Q96DL1 559 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 POLE3Q9NRF9 147 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 UPB1Q9UBR1 384 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 A0A1W2PQF6 199 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 A0A1W2PRQ8 180 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 FGF17O60258 216 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 PABPC4LP0CB38 370 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 TCN2P20062 427 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 PRKAR1BP31321 381 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 GGT2P36268 569 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 CDK5R2Q13319 367 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 TRMT12Q53H54 448 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 TMEM71Q6P5X7 295 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 CPOQ8IVL8 374 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 C1orf210Q8IVY1 113 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 UEVLDQ8IX04 471 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 ANKRD53Q8N9V6 530 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 PNLDC1Q8NA58 520 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 RNASE11Q8TAA1 199 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 GPR83Q9NYM4 423 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 KCND3Q9UK17 655 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 TMPRSS11EQ9UL52 423 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 J3KTA2 159 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 TBX1O43435 398 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 NUDT21O43809 227 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 CHRNB1P11230 501 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 RAB39AQ14964 217 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 ODF4Q2M2E3 257 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 ABI3BPQ7Z7G0 1075 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 OR5B2Q96R09 309 aa14.05□□□□□ -0.16
USP47-207ENST00000527733 RBM7Q9Y580 266 aaKnown RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 GPC6Q9Y625 555 aaPredicted RBP14.05□□□□□ -0.16
USP47-207ENST00000527733 ZDBF2Q9HCK1 2354 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 H2BFMP0C1H6 154 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 PSMD7P51665 324 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 ARG2P78540 354 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 OR5M10Q6IEU7 315 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 MED25Q71SY5 747 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 ADGRF3Q8IZF5 1079 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 PJA1Q8NG27 643 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 TMEM138Q9NPI0 162 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 NXPH1P58417 271 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 APOFQ13790 326 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 C3orf38Q5JPI3 329 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 PRSS48Q7RTY5 328 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 BPHLQ86WA6 291 aaPredicted RBP14.04□□□□□ -0.16
USP47-207ENST00000527733 ZNF283Q8N7M2 679 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 ZFP3Q96NJ6 502 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms