RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 HNRNPCL3B7ZW38 293 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 C5orf58C9J3I9 102 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 NPIPA5E9PKD4 350 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 H6PDO95479 791 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 CHRM4P08173 479 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 HNRNPCL4P0DMR1 293 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 ATP6V1C1P21283 382 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 IL12BP29460 328 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 SOX3P41225 446 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 HLCSP50747 726 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 TLE4Q04727 773 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 EFR3AQ14156 821 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 OR1C1Q15619 314 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 CCNJQ5T5M9 372 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 INTS11Q5TA45 600 aaKnown RBP15.79■□□□□ 0.12
CCS-204ENST00000526066 REEP3Q6NUK4 255 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 PGM2L1Q6PCE3 622 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 FIGNL1Q6PIW4 674 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 FRRS1Q6ZNA5 592 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 NUP54Q7Z3B4 507 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 IFNEQ86WN2 208 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 PRR22Q8IZ63 422 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 TMEM156Q8N614 296 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 NFKBIDQ8NI38 313 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 BBS10Q8TAM1 723 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 CA5BP1Q8WTZ4 195 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 SGCZQ96LD1 299 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 COL21A1Q96P44 957 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 SPOCK3Q9BQ16 436 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 CADM1Q9BY67 442 aaKnown RBP15.79■□□□□ 0.12
CCS-204ENST00000526066 TSPAN10Q9H1Z9 355 aaPredicted RBP15.79■□□□□ 0.12
CCS-204ENST00000526066 SLC38A1Q9H2H9 487 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 PIF1Q9H611 641 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 COQ3Q9NZJ6 369 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 NPIPA1Q9UND3 350 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 ANGPT4Q9Y264 503 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 WDR45Q9Y484 360 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 CELSR1Q9NYQ6 3014 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 ZFHX3Q15911 3703 aa15.79■□□□□ 0.12
CCS-204ENST00000526066 DSPPQ9NZW4 1301 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 PRRG2O14669 202 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 HS6ST1O60243 411 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 KIAA0513O60268 411 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 OR6B1O95007 311 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 PGM3O95394 542 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 PGM1P36871 562 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 BNIP2Q12982 314 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 TUBA3CQ13748 450 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 TYW3Q6IPR3 259 aaKnown RBP15.78■□□□□ 0.12
CCS-204ENST00000526066 TUBA3EQ6PEY2 450 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 SPNS3Q6ZMD2 512 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 Q6ZPB1 254 aaPredicted RBP15.78■□□□□ 0.12
CCS-204ENST00000526066 GHDCQ8N2G8 530 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 ZNF619Q8N2I2 560 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 RNF148Q8N7C7 305 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 MCUR1Q96AQ8 359 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 EFHD2Q96C19 240 aaPredicted RBP15.78■□□□□ 0.12
CCS-204ENST00000526066 ADOQ96SZ5 270 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 SECISBP2Q96T21 854 aaKnown RBP15.78■□□□□ 0.12
CCS-204ENST00000526066 TREX2Q9BQ50 279 aaPredicted RBP15.78■□□□□ 0.12
CCS-204ENST00000526066 HOXD1Q9GZZ0 328 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 MTHFD2LQ9H903 347 aaPredicted RBP15.78■□□□□ 0.12
CCS-204ENST00000526066 MCCC2Q9HCC0 563 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 FBXO34Q9NWN3 711 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 ANKRD10Q9NXR5 420 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 GMPR2Q9P2T1 348 aaKnown RBP15.78■□□□□ 0.12
CCS-204ENST00000526066 USP22Q9UPT9 525 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 ZNF835Q9Y2P0 537 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 TACC2O95359 2948 aa15.78■□□□□ 0.12
CCS-204ENST00000526066 NPIPB9F8W1W9 429 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 C19orf84I3L1E1 186 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 TP53I11O14683 189 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 FCMRO60667 390 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 UGT2B11O75310 529 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 NGFRP08138 427 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 CYP4B1P13584 511 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 ETS2P15036 469 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 ME2P23368 584 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 CYB561P49447 251 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 PCBP3P57721 371 aaKnown RBP15.77■□□□□ 0.12
CCS-204ENST00000526066 RPP38P78345 283 aaKnown RBP15.77■□□□□ 0.12
CCS-204ENST00000526066 CHRNEQ04844 493 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 FLYWCH1Q4VC44 716 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 MEX3BQ6ZN04 569 aaKnown RBP15.77■□□□□ 0.12
CCS-204ENST00000526066 CCDC80Q76M96 950 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 ZAR1Q86SH2 424 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 FBXW8Q8N3Y1 598 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 GOLM1Q8NBJ4 401 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 HGDQ93099 445 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 MUC13Q9H3R2 512 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 UBQLN4Q9NRR5 601 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 HPF1Q9NWY4 346 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 PACSIN3Q9UKS6 424 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 CSMD2Q7Z408 3487 aa15.77■□□□□ 0.12
CCS-204ENST00000526066 PDE9AO76083 593 aa15.76■□□□□ 0.11
CCS-204ENST00000526066 UTS2O95399 124 aa15.76■□□□□ 0.11
CCS-204ENST00000526066 ZNF24P17028 368 aa15.76■□□□□ 0.11
CCS-204ENST00000526066 CD96P40200 585 aa15.76■□□□□ 0.11
CCS-204ENST00000526066 RFX3P48380 749 aa15.76■□□□□ 0.11
CCS-204ENST00000526066 ATP12AP54707 1039 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms