RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CDH5P33151 784 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 PPP1R2P41236 205 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PAFAH1B1P43034 410 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 ZFP36L2P47974 494 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 GABRA4P48169 554 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 HCAR3P49019 387 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 MTTPP55157 894 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CDH11P55287 796 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PPIAP62937 165 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 MPP1Q00013 466 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 LOXL1Q08397 574 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 PPIDQ08752 370 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 CETN1Q12798 172 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 RPA4Q13156 261 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CUL2Q13617 745 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 IHHQ14623 411 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 EXT1Q16394 746 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 IL17AQ16552 155 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 C3AR1Q16581 482 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 NRF1Q16656 503 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 DPCR1Q3MIW9 517 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SLC25A52Q3SY17 297 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 POM121L1PQ3SYA9 428 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 KLHL26Q53HC5 615 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 NHSL2Q5HYW2 709 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SLC25A30Q5SVS4 291 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 C6orf52Q5T4I8 152 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 GPRC6AQ5T6X5 926 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 HENMT1Q5T8I9 393 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 KCTD11Q693B1 232 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PMF1Q6P1K2 205 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 KLC3Q6P597 504 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CORO6Q6QEF8 472 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TMEM205Q6UW68 189 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 C16orf47Q6ZP98 133 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 MMS22LQ6ZRQ5 1243 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 NLRP9Q7RTR0 991 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TMEM135Q86UB9 458 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CCDC190Q86UF4 302 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 DOLPP1Q86YN1 238 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 ARMC8Q8IUR7 673 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TMEM126BQ8IUX1 230 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 LACC1Q8IV20 430 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 C11orf53Q8IXP5 236 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 FBXW8Q8N3Y1 598 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 RTL3Q8N8U3 475 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 DNAAF3Q8N9W5 541 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CAMKVQ8NCB2 501 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 MSANTD4Q8NCY6 345 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 MCUQ8NE86 351 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 OR11G2Q8NGC1 345 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 M1APQ8TC57 530 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PSMF1Q92530 271 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SGCDQ92629 289 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 DAZLQ92904 295 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 MR1Q95460 341 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TSACCQ96A04 125 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 SLC22A18Q96BI1 424 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 DTNBP1Q96EV8 351 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SGK494Q96LW2 274 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CSPG4P5Q96PW8 444 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 OR2A14Q96R47 310 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PANX2Q96RD6 677 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 KRT12Q99456 494 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 NPY6RQ99463 290 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 NCAPGQ9BPX3 1015 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 MGME1Q9BQP7 344 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 GPATCH1Q9BRR8 931 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 CCM2Q9BSQ5 444 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 ABHD6Q9BV23 337 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SFXN3Q9BWM7 321 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CLEC7AQ9BXN2 247 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PLA2G12AQ9BZM1 189 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 THAP2Q9H0W7 228 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SLITRK2Q9H156 845 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 P2RY12Q9H244 342 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 GNB4Q9HAV0 340 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 UGT1A7Q9HAW7 530 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 UGT1A8Q9HAW9 530 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PDFQ9HBH1 243 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 MYOZ1Q9NP98 299 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 A4GALTQ9NPC4 353 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PDRG1Q9NUG6 133 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 FAM49BQ9NUQ9 324 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 RAB20Q9NX57 234 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PSD3Q9NYI0 1048 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TAS2R10Q9NYW0 307 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 OR6C2Q9NZP2 312 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TMEM9Q9P0T7 183 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 C19orf25Q9UFG5 118 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 TBC1D29Q9UFV1 150 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 HMGXB4Q9UGU5 601 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 FBXL4Q9UKA2 621 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SLC7A7Q9UM01 511 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PPIEQ9UNP9 301 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 RNF6Q9Y252 685 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 MOB4Q9Y3A3 225 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 OR1A2Q9Y585 309 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 UBR4Q5T4S7 5183 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 PLCE1Q9P212 2302 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms