RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ZNF221Q9UK13 617 aa3.59□□□□□ -1.83
HMGB1P1-201ENST00000522557 SNX6Q9UNH7 406 aa3.59□□□□□ -1.83
HMGB1P1-201ENST00000522557 L3MBTL1Q9Y468 752 aa3.59□□□□□ -1.83
HMGB1P1-201ENST00000522557 PP2D1A8MPX8 630 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 PRRG1O14668 218 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 ARPC3O15145 178 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 KIAA0754O94854 1291 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 GJB5O95377 273 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 HBQ1P09105 142 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 LAMP1P11279 417 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 LAP3P28838 519 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 ARHGDIBP52566 201 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 RIPPLY1Q0D2K3 151 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 RAB40BQ12829 278 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 IL18R1Q13478 541 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 C1orf61Q13536 156 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 PDK3Q15120 406 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 MAPK6Q16659 721 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 CYP51A1Q16850 503 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 SEL1L3Q68CR1 1132 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 ACSM5Q6NUN0 579 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 GCNT7Q6ZNI0 430 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 LRRC75A-AS1Q8N1F1 130 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 POM121L12Q8N7R1 296 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 CATSPER1Q8NEC5 780 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 RFESDQ8TAC1 157 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 FAM222BQ8WU58 562 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 TTC25Q96NG3 672 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 RIT2Q99578 217 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 GLIPR2Q9H4G4 154 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 RAB18Q9NP72 206 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 IMPAD1Q9NX62 359 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 SENP1Q9P0U3 644 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 DHRS4-AS1Q9P1J3 65 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLCO1B1Q9Y6L6 691 aa3.58□□□□□ -1.84
HMGB1P1-201ENST00000522557 TRIM64CA6NLI5 447 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SAP18O00422 153 aaKnown RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 CASKO14936 926 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 GALR3O60755 368 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SURF6O75683 361 aaKnown RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 CD55P08174 381 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 ALPIP09923 528 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 H2BFMP0C1H6 154 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 MMP11P24347 488 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 DHPSP49366 369 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SMARCA2P51531 1590 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 OSTNP61366 133 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 GSTO1P78417 241 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 MAP2K1Q02750 393 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 LAGE3Q14657 143 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 FRMPD4Q14CM0 1322 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 ABRAXAS2Q15018 415 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 PPP1R3AQ16821 1122 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLX4IPQ5VYV7 408 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 FAHD2BQ6P2I3 314 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 C9orf40Q8IXQ3 194 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLC22A18ASQ8N1D0 253 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 LYG1Q8N1E2 194 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 OR5L2Q8NGL0 311 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 NT5C3BQ969T7 300 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 FAHD2AQ96GK7 314 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SH3YL1Q96HL8 342 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 C12orf66Q96MD2 445 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLC6A7Q99884 636 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 DPH7Q9BTV6 452 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 MAGT1Q9H0U3 335 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 ARMCX1Q9P291 453 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 BAZ1BQ9UIG0 1483 aaKnown RBP3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 SCML2Q9UQR0 700 aa3.57□□□□□ -1.84
HMGB1P1-201ENST00000522557 COL5A2P05997 1499 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 C15orf38-AP3S2A0A0A6YYH1 394 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 IGHV3-35A0A0C4DH35 117 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 SAGE2PA6NJ88 616 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 NPIPA7E9PJI5 369 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 MSH4O15457 936 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZNF354AO60765 605 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 MTX2O75431 263 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 SLC2A10O95528 541 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 HPP00738 406 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 PIGRP01833 764 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 NPIPA8P0DM63 369 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 IGHV1-2P23083 117 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 CDH5P33151 784 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 HPCAL1P37235 193 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 TAGLN2P37802 199 aaKnown RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 MAGEA5P43359 124 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 P2RY1P47900 373 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 CASP4P49662 377 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 STARP49675 285 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 NOVA1P51513 510 aaKnown RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 NTHL1P78549 312 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 LRRC74AQ0VAA2 488 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 PEX6Q13608 980 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 LRRC23Q53EV4 343 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 EIF1ADQ8N9N8 165 aaKnown RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 ZSCAN4Q8NAM6 433 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 OR4D5Q8NGN0 318 aa3.56□□□□□ -1.84
HMGB1P1-201ENST00000522557 OR1F12Q8NHA8 337 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms