RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 CDC25CP30307 473 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 GABRA5P31644 462 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CA8P35219 290 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CSKP41240 450 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CCR2P41597 374 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CLCN4P51793 760 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CDKN2DP55273 166 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 TMEM50BP56557 158 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 DCAF7P61962 342 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 ELF3P78545 371 aaPredicted RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 SLC7A9P82251 487 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 HERC3Q15034 1050 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 TYSND1Q2T9J0 566 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 TTC31Q49AM3 519 aaPredicted RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 PLPP4Q5VZY2 271 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 FAM45BPQ6NSW5 357 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 TMPRSS11FQ6ZWK6 438 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 GLT6D1Q7Z4J2 308 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CCDC91Q7Z6B0 441 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 TBC1D1Q86TI0 1168 aaPredicted RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 LDB1Q86U70 411 aaPredicted RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CRLF3Q8IUI8 442 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 BBS7Q8IWZ6 715 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CDK20Q8IZL9 346 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 APCDD1Q8J025 514 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CARNMT1Q8N4J0 409 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 KIF2BQ8N4N8 673 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 ZNF781Q8N8C0 355 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 GPATCH11Q8N954 259 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 DCAF4L2Q8NA75 395 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 LPCAT1Q8NF37 534 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 OR1L3Q8NH93 324 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 RDH11Q8TC12 318 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 FAM45AQ8TCE6 357 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 BRSK1Q8TDC3 778 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 BLOC1S5Q8TDH9 187 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 MRPS31Q92665 395 aaKnown RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 BADQ92934 168 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 PEX13Q92968 403 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 NXNL1Q96CM4 212 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 TMEM237Q96Q45 408 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 SMIM14Q96QK8 99 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 NDNQ99608 321 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 OMDQ99983 421 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 EBF4Q9BQW3 602 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 SIKE1Q9BRV8 207 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 FEM1AQ9BSK4 669 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 URM1Q9BTM9 101 aaKnown RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 RPP25Q9BUL9 199 aaKnown RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 WWP1Q9H0M0 922 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 SUDS3Q9H7L9 328 aaPredicted RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 SAR1AQ9NR31 198 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 NLE1Q9NVX2 485 aaPredicted RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 TEX10Q9NXF1 929 aaPredicted RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 GPR83Q9NYM4 423 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 CPSF2Q9P2I0 782 aaKnown RBP3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 LNPEPQ9UIQ6 1025 aa3.33□□□□□ -1.88
CTHRC1-204ENST00000520880 A0A0U1RQS6 177 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 PGPEP1LA6NFU8 196 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 NEMP2A6NFY4 417 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 LRRC72A6NJI9 287 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 A8MUI8 341 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 HIDE1A8MVS5 230 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 H7C0S8 307 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 K7ERQ8 282 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 TRAFD1O14545 582 aaPredicted RBP3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 ATP6V1G2O95670 118 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 HSPA4LO95757 839 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 IGKV3-15P01624 115 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 SLC4A1P02730 911 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 ATP5BP06576 529 aaKnown RBP3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 CHRNGP07510 517 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 SERPINA6P08185 405 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 AOC1P19801 751 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 CALB2P22676 271 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 LHCGRP22888 699 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 PTPN4P29074 926 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 CD70P32970 193 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 CTNNB1P35222 781 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 KPNA2P52292 529 aaKnown RBP3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 STC1P52823 247 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 LBX1P52954 281 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 AQP5P55064 265 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 RHOAP61586 193 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 CDK3Q00526 305 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 ILF2Q12905 390 aaKnown RBP3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 CDH18Q13634 790 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 SIM2Q14190 667 aaPredicted RBP3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 RCN2Q14257 317 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 NR1D2Q14995 579 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 TAF1AQ15573 450 aaPredicted RBP3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 PDLIM3Q53GG5 364 aaPredicted RBP3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 PPM1LQ5SGD2 360 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 MPP7Q5T2T1 576 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 LYSMD4Q5XG99 296 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 AFTPHQ6ULP2 937 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 MFN1Q8IWA4 741 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 ELMOD1Q8N336 334 aa3.32□□□□□ -1.88
CTHRC1-204ENST00000520880 TTC30BQ8N4P2 665 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms