RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C12orf40Q86WS4 652 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 SPAG16Q8N0X2 631 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ARMC10Q8N2F6 343 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 SLC44A3Q8N4M1 653 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 GPR156Q8NFN8 814 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 MRPS31Q92665 395 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 TCEAL3Q969E4 200 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 TINAGL1Q9GZM7 467 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ATG10Q9H0Y0 220 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PIGMQ9H3S5 423 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 NOX3Q9HBY0 568 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 CA10Q9NS85 328 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 MRTO4Q9UKD2 239 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 GPR52Q9Y2T5 361 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 TRAV1-2A0A0B4J238 106 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 A0A1B0GTQ1 180 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 UBE2QL1A1L167 161 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 E7EQ34 232 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF197O14709 1029 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ARPC1BO15143 372 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 RLN2P04090 185 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 HPGDP15428 266 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 AP1S1P61966 158 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 MAT1AQ00266 395 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 STX4Q12846 297 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 TSPAN31Q12999 210 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 MPPED2Q15777 294 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 RPS26P11Q5JNZ5 115 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PRAMEF13Q5VWM6 474 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 OLFML2AQ68BL7 652 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 SFRP4Q6FHJ7 346 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 DHRS7BQ6IAN0 325 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF425Q6IV72 752 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF783Q6ZMS7 281 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 CHST9Q7L1S5 443 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PXKQ7Z7A4 578 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 OR10K1Q8NGX5 313 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 C16orf78Q8WTQ4 265 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 GLYATL2Q8WU03 294 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 THEM6Q8WUY1 208 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 OSTF1Q92882 214 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 DMRTA2Q96SC8 542 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PARK7Q99497 189 aaKnown RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 GSDMCQ9BYG8 508 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PRM3Q9NNZ6 103 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 INPP5EQ9NRR6 644 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 RASL12Q9NYN1 266 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 LHX3Q9UBR4 397 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 RPH3AQ9Y2J0 694 aaPredicted RBP11.99□□□□□ -0.49
SMAD1-215ENST00000515385 CHD5Q8TDI0 1954 aa11.99□□□□□ -0.49
SMAD1-215ENST00000515385 RAB19A4D1S5 217 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 DISC1C4P0D8 188 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 FOXE1O00358 373 aaPredicted RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 PLPP2O43688 288 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 SIX6O95475 246 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 ALPIP09923 528 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 MGMTP16455 207 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 VIPR1P32241 457 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 RAD52P43351 418 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 SLC11A2P49281 568 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 PSMD4P55036 377 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 CNTN1Q12860 1018 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 PIN1Q13526 163 aaPredicted RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 RNASE12Q5GAN4 147 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 FAM109BQ6ICB4 259 aaPredicted RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 LRRN1Q6UXK5 716 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 CEACAM19Q7Z692 300 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 RBM45Q8IUH3 476 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 SKA3Q8IX90 412 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 ACBD7Q8N6N7 88 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 OR4D11Q8NGI4 311 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 ELP5Q8TE02 316 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 SMAP2Q8WU79 429 aaPredicted RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 THAP4Q8WY91 577 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 PRRC1Q96M27 445 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 TSNAXQ99598 290 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 SEPT5Q99719 369 aaPredicted RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 PLA2G12AQ9BZM1 189 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF768Q9H5H4 540 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 EGLN3Q9H6Z9 239 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 OPN4Q9UHM6 478 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 GSAPA4D1B5 854 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 ARGFXA6NJG6 315 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 GABARAPH6UMI1 98 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 J3QRE1 110 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 SURF4O15260 269 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 SGCEO43556 437 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 TMEM127O75204 238 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 HTR3BO95264 441 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 NUBP1P53384 320 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 OR10A3P58181 314 aa11.98□□□□□ -0.49
SMAD1-215ENST00000515385 RPS13P62277 151 aaKnown RBP11.98□□□□□ -0.49
SMAD1-215ENST00000515385 MRPS10P82664 201 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms